RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CYBBP04839 570 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 RANGAP1P46060 587 aaPredicted RBP4.5□□□□□ -1.69
CHD9-207ENST00000562806 GFRA1P56159 465 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 CBX2Q14781 532 aaPredicted RBP4.5□□□□□ -1.69
CHD9-207ENST00000562806 TIGD5Q53EQ6 642 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 ADGRF1Q5T601 910 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 PAQR3Q6TCH7 311 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 RSPO2Q6UXX9 243 aaPredicted RBP4.5□□□□□ -1.69
CHD9-207ENST00000562806 NPLOC4Q8TAT6 608 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 DIO2Q92813 273 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 DEPDC7Q96QD5 511 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 SRPK1Q96SB4 655 aaKnown RBP4.5□□□□□ -1.69
CHD9-207ENST00000562806 ZFYVE21Q9BQ24 234 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 OSBPL2Q9H1P3 480 aa4.5□□□□□ -1.69
CHD9-207ENST00000562806 TEX51A0A1B0GUA7 166 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 CAPNS1P04632 268 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 THBDP07204 575 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 TMEM253P0C7T8 217 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 PLS3P13797 630 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 NAT1P18440 290 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 LTBRP36941 435 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 RPL11P62913 178 aaKnown RBP4.49□□□□□ -1.69
CHD9-207ENST00000562806 YBX1P67809 324 aaKnown RBP4.49□□□□□ -1.69
CHD9-207ENST00000562806 MVKQ03426 396 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 SSRP1Q08945 709 aaKnown RBP4.49□□□□□ -1.69
CHD9-207ENST00000562806 BICRALQ6AI39 1079 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 TMEM132EQ6IEE7 984 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 OGFOD2Q6N063 350 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 PRR23BQ6ZRT6 265 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 SCUBE1Q8IWY4 988 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 LZTR1Q8N653 840 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 NETO2Q8NC67 525 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 FRS2Q8WU20 508 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 MRFAP1L1Q96HT8 127 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 DIRC2Q96SL1 478 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 PLCD4Q9BRC7 762 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 TNFRSF12AQ9NP84 129 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.49□□□□□ -1.69
CHD9-207ENST00000562806 CLEC1BQ9P126 229 aa4.49□□□□□ -1.69
CHD9-207ENST00000562806 TIMM13Q9Y5L4 95 aaPredicted RBP4.49□□□□□ -1.69
CHD9-207ENST00000562806 C7orf72A4D263 438 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 NFIBO00712 420 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 ZBTB7AO95365 584 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 GLDCP23378 1020 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 ECI1P42126 302 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 MAPKAPK2P49137 400 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 CEBPAP49715 358 aaPredicted RBP4.48□□□□□ -1.69
CHD9-207ENST00000562806 RASA3Q14644 834 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 SLC9A5Q14940 896 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 RAB3GAP1Q15042 981 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 SLC35F1Q5T1Q4 408 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 MROH9Q5TGP6 573 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 NSMFQ6X4W1 530 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 SIRT2Q8IXJ6 389 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 PPIL6Q8IXY8 311 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 ZBTB38Q8NAP3 1195 aaPredicted RBP4.48□□□□□ -1.69
CHD9-207ENST00000562806 PMFBP1Q8TBY8 1022 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 USP33Q8TEY7 942 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 DCAF4Q8WV16 495 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 PEX11GQ96HA9 241 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 CDC6Q99741 560 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 GPRC5CQ9NQ84 441 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 GPR27Q9NS67 375 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 SIRT5Q9NXA8 310 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 SNTG2Q9NY99 539 aa4.48□□□□□ -1.69
CHD9-207ENST00000562806 CCDC85CA6NKD9 419 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 H7BY64 318 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 TSPAN15O95858 294 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 PABPC1P11940 636 aaKnown RBP4.47□□□□□ -1.69
CHD9-207ENST00000562806 MESP2Q0VG99 397 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 TARBP2Q15633 366 aaKnown RBP4.47□□□□□ -1.69
CHD9-207ENST00000562806 CHRNA2Q15822 529 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 ZC3H14Q6PJT7 736 aaKnown RBP4.47□□□□□ -1.69
CHD9-207ENST00000562806 ZNF605Q86T29 641 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 CPNE8Q86YQ8 564 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 DCP2Q8IU60 420 aaKnown RBP4.47□□□□□ -1.69
CHD9-207ENST00000562806 RIOX2Q8IUF8 465 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 TMEM145Q8NBT3 493 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 ZSWIM2Q8NEG5 633 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 THAP3Q8WTV1 239 aaPredicted RBP4.47□□□□□ -1.69
CHD9-207ENST00000562806 KCNN1Q92952 543 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 DNAJC2Q99543 621 aaKnown RBP4.47□□□□□ -1.69
CHD9-207ENST00000562806 IER2Q9BTL4 223 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 ARHGEF4Q9NR80 690 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 DBR1Q9UK59 544 aaKnown RBP4.47□□□□□ -1.69
CHD9-207ENST00000562806 COA3Q9Y2R0 106 aaPredicted RBP4.47□□□□□ -1.69
CHD9-207ENST00000562806 NPFFR2Q9Y5X5 522 aa4.47□□□□□ -1.69
CHD9-207ENST00000562806 KDM2BQ8NHM5 1336 aa4.46□□□□□ -1.69
CHD9-207ENST00000562806 TRBV23-1A0A0A0MS06 115 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 TCAF2A6NFQ2 919 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 AQP7O14520 342 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 PRODHO43272 600 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 MAFKO60675 156 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 DBHP09172 617 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 MED14OSP0DP75 135 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 GLI4P10075 376 aa4.46□□□□□ -1.7
CHD9-207ENST00000562806 YBX3P16989 372 aaKnown RBP eCLIP4.46□□□□□ -1.7
CHD9-207ENST00000562806 SUMO1P63165 101 aaKnown RBP4.46□□□□□ -1.7
CHD9-207ENST00000562806 SRSF3P84103 164 aaKnown RBP4.46□□□□□ -1.7
CHD9-207ENST00000562806 LSAMPQ13449 338 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms