RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 LRRC41Q15345 812 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 LRRC26Q2I0M4 334 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 USH1GQ495M9 461 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ARMCX2Q7L311 632 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CCDC144CPQ8IYA2 1237 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 RANBP17Q9H2T7 1088 aaKnown RBP10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ABHD16BQ9H3Z7 469 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 A1CFQ9NQ94 594 aaKnown RBP10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PRDM5Q9NQX1 630 aaPredicted RBP10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ZSWIM5Q9P217 1185 aa10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 RBM27Q9P2N5 1060 aaKnown RBP10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ZNF536O15090 1300 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 B4DLN1 442 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 C6orf222P0C671 652 aaPredicted RBP10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ZNF865P0CJ78 1059 aaPredicted RBP10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CALML3P27482 149 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 MRPL12P52815 198 aaKnown RBP10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 FOXK1P85037 733 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CCDC144BQ3MJ40 725 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ASPRV1Q53RT3 343 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 MUM1L1Q5H9M0 696 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 MAMDC4Q6UXC1 1216 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 BTNL9Q6UXG8 535 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 RNF207Q6ZRF8 634 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ENAHQ8N8S7 591 aaPredicted RBP10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 NUP133Q8WUM0 1156 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 LENG1Q96BZ8 264 aaPredicted RBP10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CCDC136Q96JN2 1154 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 UBE2OQ9C0C9 1292 aaKnown RBP10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CYP39A1Q9NYL5 469 aa10.86□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CEP290O15078 2479 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 IFIT3O14879 490 aaKnown RBP10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 SGSM2O43147 1006 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 SNAI1O95863 264 aaPredicted RBP10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 IGHA2P01877 340 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 RTP1P59025 263 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 SLC39A5Q6ZMH5 540 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 EEPD1Q7L9B9 569 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 NCOA7Q8NI08 942 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 UBA5Q9GZZ9 404 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 AP5M1Q9H0R1 490 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ALPK3Q96L96 1907 aa10.85□□□□□ -0.67
CHRFAM7A-204ENST00000562729 SYNRGQ9UMZ2 1314 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 DUSP11O75319 330 aaKnown RBP10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 MDM2Q00987 491 aaPredicted RBP10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 TNFAIP2Q03169 654 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PTH1RQ03431 593 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PDE4DQ08499 809 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 BAATQ14032 418 aaPredicted RBP10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 WTAPQ15007 396 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 CDC37Q16543 378 aaPredicted RBP10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 GNASQ5JWF2 1037 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PLPP6Q8IY26 295 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 FAM133AQ8N9E0 248 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 PCSK9Q8NBP7 692 aaKnown RBP10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 GLT1D1Q96MS3 346 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 IL25Q9H293 177 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 ANO2Q9NQ90 1003 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 STARD7Q9NQZ5 370 aa10.84□□□□□ -0.67
CHRFAM7A-204ENST00000562729 A0A1W2PPC1 479 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 A0A1W2PQ45 241 aaPredicted RBP10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 A0A1W2PQY0 241 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SOWAHBA6NEL2 793 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 E7EWF7 191 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 NFIBO00712 420 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ZEB2O60315 1214 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PQBP1O60828 265 aaKnown RBP10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CYP21A2P08686 494 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SNHG28P0DPA3 235 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MAGEA10P43363 369 aaPredicted RBP10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ACLYP53396 1101 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 KCNA10Q16322 511 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TRIM60Q495X7 471 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TMEM67Q5HYA8 995 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 NFXL1Q6ZNB6 911 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CATIPQ7Z7H3 387 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 FBXO11Q86XK2 927 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MCF2L2Q86YR7 1114 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ADGRF4Q8IZF3 695 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ANKS1AQ92625 1134 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TSEN34Q9BSV6 310 aaKnown RBP10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CPVLQ9H3G5 476 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PHF24Q9UPV7 400 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 RBM8AQ9Y5S9 174 aaKnown RBP10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ABCB11O95342 1321 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 WDR19Q8NEZ3 1342 aa10.83□□□□□ -0.68
CHRFAM7A-204ENST00000562729 DNAH12Q6ZR08 3092 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MOXD2PA6NHM9 499 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 DCDC2CA8MYV0 355 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 KLRF2D3W0D1 207 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 FXR1P51114 621 aaKnown RBP eCLIP10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ALDH5A1P51649 535 aaPredicted RBP10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TRAF1Q13077 416 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 RNF20Q5VTR2 975 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SLC30A10Q6XR72 485 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms