RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 HMGB1P09429 215 aaKnown RBP17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 RARBP10826 455 aa17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 COL6A1P12109 1028 aa17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 KIF5BP33176 963 aa17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 APOA5Q6Q788 366 aa17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 CMTR1Q8N1G2 835 aaKnown RBP17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 SRBD1Q8N5C6 995 aaKnown RBP17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 RGS22Q8NE09 1264 aa17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 SPZ1Q9BXG8 430 aa17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 COL20A1Q9P218 1284 aa17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 MRPL11Q9Y3B7 192 aaKnown RBP17.85■□□□□ 0.45
CCNDBP1-203ENST00000562553 EVI5O60447 810 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 PGK1P00558 417 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 MYCNP04198 464 aaPredicted RBP17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 CALM1P0DP23 149 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 CALM2P0DP24 149 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 CALM3P0DP25 149 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 LRRC41Q15345 812 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 CCDC144BQ3MJ40 725 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 BLOC1S2Q6QNY1 142 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 EEPD1Q7L9B9 569 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 FBXO16Q8IX29 292 aaPredicted RBP17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 SYTL5Q8TDW5 730 aaPredicted RBP17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 MORC4Q8TE76 937 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 XPNPEP3Q9NQH7 507 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 RBM27Q9P2N5 1060 aaKnown RBP17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 ADD3Q9UEY8 706 aaKnown RBP17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 FAM184BQ9ULE4 1060 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 PCDHA1Q9Y5I3 950 aa17.84■□□□□ 0.45
CCNDBP1-203ENST00000562553 PNMA6FA0A0J9YX94 578 aa17.83■□□□□ 0.44
CCNDBP1-203ENST00000562553 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.83■□□□□ 0.44
CCNDBP1-203ENST00000562553 DNM1LO00429 736 aa17.83■□□□□ 0.44
CCNDBP1-203ENST00000562553 CASTP20810 708 aaKnown RBP17.83■□□□□ 0.44
CCNDBP1-203ENST00000562553 RPS6KB1P23443 525 aa17.83■□□□□ 0.44
CCNDBP1-203ENST00000562553 Q6ZUG5 572 aa17.83■□□□□ 0.44
CCNDBP1-203ENST00000562553 FANCBQ8NB91 859 aa17.83■□□□□ 0.44
CCNDBP1-203ENST00000562553 PDGFCQ9NRA1 345 aa17.83■□□□□ 0.44
CCNDBP1-203ENST00000562553 SYNRGQ9UMZ2 1314 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 KLF18A0A0U1RQI7 1052 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 CFBP00751 764 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 PTGS1P23219 599 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 SMARCA1P28370 1054 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 ADCYAP1R1P41586 468 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 GNAQP50148 359 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 IRX5P78411 483 aaPredicted RBP17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 TAPT1Q6NXT6 567 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 TMTC3Q6ZXV5 915 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 MCF2L2Q86YR7 1114 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 ARRDC4Q8NCT1 418 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 TAAR1Q96RJ0 339 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 LZTS2Q9BRK4 669 aa17.82■□□□□ 0.44
CCNDBP1-203ENST00000562553 KIAA1217Q5T5P2 1943 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 A0A1W2PPC1 479 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 hCG_1642624A0A1W2PR95 340 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 MYADML2A6NDP7 307 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 ZBTB43O43298 467 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 ADAMTS4O75173 837 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 EDNRBP24530 442 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 PSMA5P28066 241 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 HSD17B4P51659 736 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 GHRHRQ02643 423 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 APOBRQ0VD83 1088 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 TMEM63BQ5T3F8 832 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 SYNE3Q6ZMZ3 975 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 CCDC82Q8N4S0 544 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 DNERQ8NFT8 737 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 BRF1Q92994 677 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 RRP36Q96EU6 259 aaKnown RBP17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 SENP6Q9GZR1 1112 aaPredicted RBP17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 SZT2Q5T011 3432 aa17.81■□□□□ 0.44
CCNDBP1-203ENST00000562553 CNTNAP5Q8WYK1 1306 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 DNAH12Q6ZR08 3092 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 LOC102724159A0A0B4J2E5 919 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 GOLGA8AA7E2F4 631 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 GOLGA8BA8MQT2 603 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 KBTBD13C9JR72 458 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 DUSP11O75319 330 aaKnown RBP17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 FGD1P98174 961 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 PWP2Q15269 919 aaKnown RBP17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 RTN1Q16799 776 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 LRRC26Q2I0M4 334 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 MAF1Q9H063 256 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 VTA1Q9NP79 307 aa17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 FAM217BQ9NTX9 383 aaPredicted RBP17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
CCNDBP1-203ENST00000562553 SMPD1P17405 629 aa17.79■□□□□ 0.44
CCNDBP1-203ENST00000562553 CDC27P30260 824 aa17.79■□□□□ 0.44
CCNDBP1-203ENST00000562553 HOXA13P31271 388 aaPredicted RBP17.79■□□□□ 0.44
CCNDBP1-203ENST00000562553 TNFAIP2Q03169 654 aa17.79■□□□□ 0.44
CCNDBP1-203ENST00000562553 PDE4DQ08499 809 aa17.79■□□□□ 0.44
CCNDBP1-203ENST00000562553 AGXT2Q9BYV1 514 aa17.79■□□□□ 0.44
CCNDBP1-203ENST00000562553 ZSWIM6Q9HCJ5 1215 aa17.79■□□□□ 0.44
CCNDBP1-203ENST00000562553 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
CCNDBP1-203ENST00000562553 GNEQ9Y223 722 aaKnown RBP17.79■□□□□ 0.44
CCNDBP1-203ENST00000562553 EIF2AK2P19525 551 aaKnown RBP17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 ATN1P54259 1190 aaPredicted RBP17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 FUT2Q10981 343 aa17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 TRAF1Q13077 416 aa17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 RUFY3Q7L099 469 aa17.78■□□□□ 0.44
CCNDBP1-203ENST00000562553 RNF180Q86T96 592 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms