RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 ADCYAP1R1P41586 468 aa22.47■■□□□ 1.19
TMEM249-202ENST00000562477 CTCFLQ8NI51 663 aaPredicted RBP22.47■■□□□ 1.19
TMEM249-202ENST00000562477 MORC4Q8TE76 937 aa22.47■■□□□ 1.19
TMEM249-202ENST00000562477 FERMT2Q96AC1 680 aa22.47■■□□□ 1.19
TMEM249-202ENST00000562477 AMNQ9BXJ7 453 aa22.47■■□□□ 1.19
TMEM249-202ENST00000562477 MRPL11Q9Y3B7 192 aaKnown RBP22.47■■□□□ 1.19
TMEM249-202ENST00000562477 SNX14Q9Y5W7 946 aa22.47■■□□□ 1.19
TMEM249-202ENST00000562477 NR2E3Q9Y5X4 410 aa22.47■■□□□ 1.19
TMEM249-202ENST00000562477 SYNRGQ9UMZ2 1314 aa22.47■■□□□ 1.19
TMEM249-202ENST00000562477 MYH6P13533 1939 aa22.47■■□□□ 1.19
TMEM249-202ENST00000562477 REC8O95072 547 aa22.46■■□□□ 1.19
TMEM249-202ENST00000562477 KRT32Q14532 448 aa22.46■■□□□ 1.19
TMEM249-202ENST00000562477 TMEM63BQ5T3F8 832 aa22.46■■□□□ 1.19
TMEM249-202ENST00000562477 TAPT1Q6NXT6 567 aa22.46■■□□□ 1.19
TMEM249-202ENST00000562477 DHX32Q7L7V1 743 aaKnown RBP22.46■■□□□ 1.19
TMEM249-202ENST00000562477 CMTR1Q8N1G2 835 aaKnown RBP22.46■■□□□ 1.19
TMEM249-202ENST00000562477 TMTC2Q8N394 836 aa22.46■■□□□ 1.19
TMEM249-202ENST00000562477 RGS22Q8NE09 1264 aa22.46■■□□□ 1.19
TMEM249-202ENST00000562477 SYTL5Q8TDW5 730 aaPredicted RBP22.46■■□□□ 1.19
TMEM249-202ENST00000562477 MAP3K14Q99558 947 aa22.46■■□□□ 1.19
TMEM249-202ENST00000562477 ADD3Q9UEY8 706 aaKnown RBP22.46■■□□□ 1.19
TMEM249-202ENST00000562477 ZMYND8Q9ULU4 1186 aaPredicted RBP22.46■■□□□ 1.19
TMEM249-202ENST00000562477 PCDHA1Q9Y5I3 950 aa22.46■■□□□ 1.19
TMEM249-202ENST00000562477 LRRC37A2A6NM11 1700 aa22.45■■□□□ 1.19
TMEM249-202ENST00000562477 DUSP11O75319 330 aaKnown RBP22.45■■□□□ 1.18
TMEM249-202ENST00000562477 SRBD1Q8N5C6 995 aaKnown RBP22.45■■□□□ 1.18
TMEM249-202ENST00000562477 JAKMIP1Q96N16 626 aaKnown RBP22.45■■□□□ 1.18
TMEM249-202ENST00000562477 TAAR1Q96RJ0 339 aa22.45■■□□□ 1.18
TMEM249-202ENST00000562477 SLC12A7Q9Y666 1083 aa22.45■■□□□ 1.18
TMEM249-202ENST00000562477 KIF5BP33176 963 aa22.44■■□□□ 1.18
TMEM249-202ENST00000562477 NOL8Q76FK4 1167 aaKnown RBP22.44■■□□□ 1.18
TMEM249-202ENST00000562477 RNF180Q86T96 592 aa22.44■■□□□ 1.18
TMEM249-202ENST00000562477 SGMS1Q86VZ5 419 aa22.44■■□□□ 1.18
TMEM249-202ENST00000562477 MICU3Q86XE3 530 aa22.44■■□□□ 1.18
TMEM249-202ENST00000562477 KLHDC9Q8NEP7 349 aa22.44■■□□□ 1.18
TMEM249-202ENST00000562477 TRIOBPQ9H2D6 2365 aa22.44■■□□□ 1.18
TMEM249-202ENST00000562477 VTA1Q9NP79 307 aa22.44■■□□□ 1.18
TMEM249-202ENST00000562477 BRPF3Q9ULD4 1205 aa22.44■■□□□ 1.18
TMEM249-202ENST00000562477 PHF24Q9UPV7 400 aa22.44■■□□□ 1.18
TMEM249-202ENST00000562477 RANBP2P49792 3224 aaKnown RBP22.44■■□□□ 1.18
TMEM249-202ENST00000562477 PNMA6FA0A0J9YX94 578 aa22.43■■□□□ 1.18
TMEM249-202ENST00000562477 CFBP00751 764 aa22.43■■□□□ 1.18
TMEM249-202ENST00000562477 SMPD1P17405 629 aa22.43■■□□□ 1.18
TMEM249-202ENST00000562477 SYN1P17600 705 aa22.43■■□□□ 1.18
TMEM249-202ENST00000562477 EDNRBP24530 442 aa22.43■■□□□ 1.18
TMEM249-202ENST00000562477 TNFAIP2Q03169 654 aa22.43■■□□□ 1.18
TMEM249-202ENST00000562477 MCF2L2Q86YR7 1114 aa22.43■■□□□ 1.18
TMEM249-202ENST00000562477 SPZ1Q9BXG8 430 aa22.43■■□□□ 1.18
TMEM249-202ENST00000562477 UPF3AQ9H1J1 476 aaKnown RBP22.43■■□□□ 1.18
TMEM249-202ENST00000562477 CTAGE5O15320 804 aa22.42■■□□□ 1.18
TMEM249-202ENST00000562477 C6orf222P0C671 652 aaPredicted RBP22.42■■□□□ 1.18
TMEM249-202ENST00000562477 RTP1P59025 263 aa22.42■■□□□ 1.18
TMEM249-202ENST00000562477 PDE4DQ08499 809 aa22.42■■□□□ 1.18
TMEM249-202ENST00000562477 CCSAPQ6IQ19 270 aaPredicted RBP22.42■■□□□ 1.18
TMEM249-202ENST00000562477 APOA5Q6Q788 366 aa22.42■■□□□ 1.18
TMEM249-202ENST00000562477 DNERQ8NFT8 737 aa22.42■■□□□ 1.18
TMEM249-202ENST00000562477 GNEQ9Y223 722 aaKnown RBP22.42■■□□□ 1.18
TMEM249-202ENST00000562477 hCG_1642624A0A1W2PR95 340 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 CALM1P0DP23 149 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 CALM2P0DP24 149 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 CALM3P0DP25 149 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 HOXA13P31271 388 aaPredicted RBP22.41■■□□□ 1.18
TMEM249-202ENST00000562477 HSD17B4P51659 736 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 GJA9P57773 515 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 BEX3Q00994 111 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 KCNA10Q16322 511 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 SLC39A5Q6ZMH5 540 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 CCDC82Q8N4S0 544 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 FANCBQ8NB91 859 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 USP26Q9BXU7 913 aa22.41■■□□□ 1.18
TMEM249-202ENST00000562477 COLQQ9Y215 455 aaPredicted RBP22.41■■□□□ 1.18
TMEM249-202ENST00000562477 LOC102724159A0A0B4J2E5 919 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 A0A1W2PQ45 241 aaPredicted RBP22.4■■□□□ 1.18
TMEM249-202ENST00000562477 A0A1W2PQY0 241 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 GNAQP50148 359 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 PWP2Q15269 919 aaKnown RBP22.4■■□□□ 1.18
TMEM249-202ENST00000562477 IQSEC1Q6DN90 963 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 CHRDL2Q6WN34 429 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 TMTC3Q6ZXV5 915 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 TLK2Q86UE8 772 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 RRP36Q96EU6 259 aaKnown RBP22.4■■□□□ 1.18
TMEM249-202ENST00000562477 RMDN3Q96TC7 470 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 LZTS2Q9BRK4 669 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 ATP11BQ9Y2G3 1177 aa22.4■■□□□ 1.18
TMEM249-202ENST00000562477 KLF18A0A0U1RQI7 1052 aa22.39■■□□□ 1.17
TMEM249-202ENST00000562477 DYNC1LI2O43237 492 aaPredicted RBP22.39■■□□□ 1.17
TMEM249-202ENST00000562477 HMGB1P09429 215 aaKnown RBP22.39■■□□□ 1.17
TMEM249-202ENST00000562477 EIF2AK2P19525 551 aaKnown RBP22.39■■□□□ 1.17
TMEM249-202ENST00000562477 CST5P28325 142 aaPredicted RBP22.39■■□□□ 1.17
TMEM249-202ENST00000562477 ACLYP53396 1101 aa22.39■■□□□ 1.17
TMEM249-202ENST00000562477 GHRHRQ02643 423 aa22.39■■□□□ 1.17
TMEM249-202ENST00000562477 TRIM60Q495X7 471 aa22.39■■□□□ 1.17
TMEM249-202ENST00000562477 BLOC1S2Q6QNY1 142 aa22.39■■□□□ 1.17
TMEM249-202ENST00000562477 TSEN34Q9BSV6 310 aaKnown RBP22.39■■□□□ 1.17
TMEM249-202ENST00000562477 WDR11Q9BZH6 1224 aa22.39■■□□□ 1.17
TMEM249-202ENST00000562477 MAF1Q9H063 256 aa22.39■■□□□ 1.17
TMEM249-202ENST00000562477 RBM47A0AV96 593 aaKnown RBP22.38■■□□□ 1.17
TMEM249-202ENST00000562477 SMARCA1P28370 1054 aa22.38■■□□□ 1.17
TMEM249-202ENST00000562477 APOBRQ0VD83 1088 aa22.38■■□□□ 1.17
TMEM249-202ENST00000562477 GNASQ5JWF2 1037 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms