RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 RPUSD2Q8IZ73 545 aaKnown RBP12.14□□□□□ -0.47
BBS4-205ENST00000562219 OTUD7AQ8TE49 926 aaPredicted RBP12.14□□□□□ -0.47
BBS4-205ENST00000562219 ADAMTS19Q8TE59 1207 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 ALDH8A1Q9H2A2 487 aaPredicted RBP12.14□□□□□ -0.47
BBS4-205ENST00000562219 RANBP17Q9H2T7 1088 aaKnown RBP12.14□□□□□ -0.47
BBS4-205ENST00000562219 ADD3Q9UEY8 706 aaKnown RBP12.14□□□□□ -0.47
BBS4-205ENST00000562219 SLC4A7Q9Y6M7 1214 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 BDP1A6H8Y1 2624 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 TET1Q8NFU7 2136 aa12.14□□□□□ -0.47
BBS4-205ENST00000562219 PRRC2BQ5JSZ5 2229 aaKnown RBP12.13□□□□□ -0.47
BBS4-205ENST00000562219 LOC102724159A0A0B4J2E5 919 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 ORC4O43929 436 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 RANBP6O60518 1105 aaKnown RBP12.13□□□□□ -0.47
BBS4-205ENST00000562219 PFKMP08237 780 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 MX1P20591 662 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 NOVP48745 357 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 ALDH5A1P51649 535 aaPredicted RBP12.13□□□□□ -0.47
BBS4-205ENST00000562219 MRPS5P82675 430 aaKnown RBP12.13□□□□□ -0.47
BBS4-205ENST00000562219 PWP2Q15269 919 aaKnown RBP12.13□□□□□ -0.47
BBS4-205ENST00000562219 CCDC85BQ15834 202 aaPredicted RBP12.13□□□□□ -0.47
BBS4-205ENST00000562219 TMEM63BQ5T3F8 832 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
BBS4-205ENST00000562219 INCENPQ9NQS7 918 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 PCDHA11Q9Y5I1 949 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 XIRP2A4UGR9 3374 aa12.13□□□□□ -0.47
BBS4-205ENST00000562219 TNKSO95271 1327 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 SUPT20HL2P0C7V6 817 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 CPT1AP50416 773 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 RABGGTBP53611 331 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 PURAQ00577 322 aaKnown RBP12.12□□□□□ -0.47
BBS4-205ENST00000562219 BAATQ14032 418 aaPredicted RBP12.12□□□□□ -0.47
BBS4-205ENST00000562219 BTNL9Q6UXG8 535 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 IL27Q8NEV9 243 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 VWCEQ96DN2 955 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 SCLYQ96I15 445 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 WDR11Q9BZH6 1224 aa12.12□□□□□ -0.47
BBS4-205ENST00000562219 TRMT13Q9NUP7 481 aaKnown RBP12.12□□□□□ -0.47
BBS4-205ENST00000562219 RAD50Q92878 1312 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 PTPDC1A2A3K4 754 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 NFIBO00712 420 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 FGRP09769 529 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 CYP2C9P11712 490 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 MYOGP15173 224 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 ATP2A2P16615 1042 aaKnown RBP12.11□□□□□ -0.47
BBS4-205ENST00000562219 SLC16A2P36021 539 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 VPS53Q5VIR6 699 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 SYDE2Q5VT97 1194 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 MPHOSPH6Q99547 160 aaKnown RBP12.11□□□□□ -0.47
BBS4-205ENST00000562219 MTG1Q9BT17 334 aaPredicted RBP12.11□□□□□ -0.47
BBS4-205ENST00000562219 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
BBS4-205ENST00000562219 PNMA2Q9UL42 364 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 SALL3Q9BXA9 1300 aa12.11□□□□□ -0.47
BBS4-205ENST00000562219 SIP14410 1827 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 RBM47A0AV96 593 aaKnown RBP12.1□□□□□ -0.47
BBS4-205ENST00000562219 MYL3P08590 195 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 TOP1P11387 765 aaKnown RBP12.1□□□□□ -0.47
BBS4-205ENST00000562219 COL9A1P20849 921 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 TTLL4Q14679 1199 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 ALX1Q15699 326 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 BRDTQ58F21 947 aaPredicted RBP12.1□□□□□ -0.47
BBS4-205ENST00000562219 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 SLC30A10Q6XR72 485 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 OR6J1Q8NGC5 347 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 UHRF1Q96T88 793 aaPredicted RBP12.1□□□□□ -0.47
BBS4-205ENST00000562219 TMEM47Q9BQJ4 181 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
BBS4-205ENST00000562219 TOMM22Q9NS69 142 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 PCDHB15Q9Y5E8 787 aa12.1□□□□□ -0.47
BBS4-205ENST00000562219 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
BBS4-205ENST00000562219 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 NKRFO15226 690 aaKnown RBP eCLIP12.09□□□□□ -0.47
BBS4-205ENST00000562219 CA3P07451 260 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 ACTN1P12814 892 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 CALML3P27482 149 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 RFC2P35250 354 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 PDE4DQ08499 809 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 TMEM67Q5HYA8 995 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
BBS4-205ENST00000562219 NFRKBQ6P4R8 1299 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 RNF207Q6ZRF8 634 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 DEFB128Q7Z7B8 93 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 MICALL1Q8N3F8 863 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 SCFD2Q8WU76 684 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 CLEC4DQ8WXI8 215 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 EVI5LQ96CN4 794 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 SLC9A7Q96T83 725 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 GPCPD1Q9NPB8 672 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 HELLSQ9NRZ9 838 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 TCP11L1Q9NUJ3 509 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 ZMYM6O95789 1325 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 WDR19Q8NEZ3 1342 aa12.09□□□□□ -0.47
BBS4-205ENST00000562219 A6NJR5 290 aa12.08□□□□□ -0.48
BBS4-205ENST00000562219 KPNA6O60684 536 aa12.08□□□□□ -0.48
BBS4-205ENST00000562219 PDHBP11177 359 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms