RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 ZNF333Q96JL9 665 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 ZSCAN31Q96LW9 406 aaPredicted RBP16.14■□□□□ 0.17
IFT140-205ENST00000561954 SLC26A6Q9BXS9 759 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 GLT8D2Q9H1C3 349 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 NRBP1Q9UHY1 535 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 STK36Q9NRP7 1315 aa16.14■□□□□ 0.17
IFT140-205ENST00000561954 ASB14A6NK59 587 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 PRPF3O43395 683 aaKnown RBP16.13■□□□□ 0.17
IFT140-205ENST00000561954 SCG2P13521 617 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 CALML3P27482 149 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 NAPAP54920 295 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 SSRP1Q08945 709 aaKnown RBP16.13■□□□□ 0.17
IFT140-205ENST00000561954 BAATQ14032 418 aaPredicted RBP16.13■□□□□ 0.17
IFT140-205ENST00000561954 NTRK3Q16288 839 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 CCL14Q16627 93 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 PFKFB3Q16875 520 aaPredicted RBP16.13■□□□□ 0.17
IFT140-205ENST00000561954 FAM177A1Q8N128 213 aaPredicted RBP16.13■□□□□ 0.17
IFT140-205ENST00000561954 CCDC148Q8NFR7 591 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 DNERQ8NFT8 737 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 CUL5Q93034 780 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 ABHD8Q96I13 439 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 LARP6Q9BRS8 491 aaKnown RBP16.13■□□□□ 0.17
IFT140-205ENST00000561954 BARHL2Q9NY43 387 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 V9GY48 417 aaPredicted RBP16.13■□□□□ 0.17
IFT140-205ENST00000561954 MYH6P13533 1939 aa16.13■□□□□ 0.17
IFT140-205ENST00000561954 hCG_1642624A0A1W2PR95 340 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 GCOM1H8Y6P7 765 aaPredicted RBP16.12■□□□□ 0.17
IFT140-205ENST00000561954 DEXIO95424 95 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 CFBP00751 764 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 POLR2MP0CAP2 368 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 PRKAR2AP13861 404 aaKnown RBP16.12■□□□□ 0.17
IFT140-205ENST00000561954 HSD17B4P51659 736 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 ME3Q16798 604 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 WWC2Q6AWC2 1192 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 MAMDC4Q6UXC1 1216 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 PHKBQ93100 1093 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 TINF2Q9BSI4 451 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 CNPY2Q9Y2B0 182 aa16.12■□□□□ 0.17
IFT140-205ENST00000561954 PIK3CDO00329 1044 aa16.11■□□□□ 0.17
IFT140-205ENST00000561954 OPLAHO14841 1288 aa16.11■□□□□ 0.17
IFT140-205ENST00000561954 CNTN2Q02246 1040 aa16.11■□□□□ 0.17
IFT140-205ENST00000561954 MAP3K21Q5TCX8 1036 aa16.11■□□□□ 0.17
IFT140-205ENST00000561954 WASF1Q92558 559 aa16.11■□□□□ 0.17
IFT140-205ENST00000561954 GPKOWQ92917 476 aaPredicted RBP eCLIP16.11■□□□□ 0.17
IFT140-205ENST00000561954 FLRT1Q9NZU1 646 aa16.11■□□□□ 0.17
IFT140-205ENST00000561954 CENPFP49454 3210 aa16.1■□□□□ 0.17
IFT140-205ENST00000561954 PLXNA1Q9UIW2 1896 aa16.1■□□□□ 0.17
IFT140-205ENST00000561954 ESYT2A0FGR8 921 aa16.1■□□□□ 0.17
IFT140-205ENST00000561954 STXBP3O00186 592 aa16.1■□□□□ 0.17
IFT140-205ENST00000561954 IGHA2P01877 340 aa16.1■□□□□ 0.17
IFT140-205ENST00000561954 XBP1P17861 261 aa16.1■□□□□ 0.17
IFT140-205ENST00000561954 ALDH5A1P51649 535 aaPredicted RBP16.1■□□□□ 0.17
IFT140-205ENST00000561954 ADCY7P51828 1080 aa16.1■□□□□ 0.17
IFT140-205ENST00000561954 SYTL5Q8TDW5 730 aaPredicted RBP16.1■□□□□ 0.17
IFT140-205ENST00000561954 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
IFT140-205ENST00000561954 HMX1Q9NP08 348 aaPredicted RBP16.1■□□□□ 0.17
IFT140-205ENST00000561954 RPTORQ8N122 1335 aa16.1■□□□□ 0.17
IFT140-205ENST00000561954 SOWAHBA6NEL2 793 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 MSCO60682 206 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 LARGE1O95461 756 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 CYBAP13498 195 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 CAPN2P17655 700 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 CYP2C19P33261 490 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 ARMCX2Q7L311 632 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 SMARCC2Q8TAQ2 1214 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 BICD2Q8TD16 824 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 NSUN6Q8TEA1 469 aaKnown RBP16.09■□□□□ 0.17
IFT140-205ENST00000561954 FGD4Q96M96 766 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 LLPHQ9BRT6 129 aaKnown RBP16.09■□□□□ 0.17
IFT140-205ENST00000561954 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.09■□□□□ 0.17
IFT140-205ENST00000561954 EHMT1Q9H9B1 1298 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 SH3GLB2Q9NR46 395 aa16.09■□□□□ 0.17
IFT140-205ENST00000561954 LRRC37A2A6NM11 1700 aa16.08■□□□□ 0.17
IFT140-205ENST00000561954 CCL5P13501 91 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 GNA11P29992 359 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 CACNB2Q08289 660 aaPredicted RBP16.08■□□□□ 0.16
IFT140-205ENST00000561954 PDE4DQ08499 809 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 ARHGEF16Q5VV41 709 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 MCTP2Q6DN12 878 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 MORC4Q8TE76 937 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 IWS1Q96ST2 819 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 RMDN3Q96TC7 470 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 TMEM106CQ9BVX2 250 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 ABHD16BQ9H3Z7 469 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 C6orf50Q9HD87 102 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 VTA1Q9NP79 307 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 RIC8AQ9NPQ8 531 aa16.08■□□□□ 0.16
IFT140-205ENST00000561954 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
IFT140-205ENST00000561954 SPDYE3A6NKU9 549 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 EDNRBP24530 442 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 HOXA13P31271 388 aaPredicted RBP16.07■□□□□ 0.16
IFT140-205ENST00000561954 HMGN5P82970 282 aaKnown RBP16.07■□□□□ 0.16
IFT140-205ENST00000561954 TRIM32Q13049 653 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 AP3B2Q13367 1082 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 PKN1Q16512 942 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 CCDC83Q8IWF9 413 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 NSUN7Q8NE18 718 aaKnown RBP16.07■□□□□ 0.16
IFT140-205ENST00000561954 RNF208Q9H0X6 261 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 PAK6Q9NQU5 681 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms