RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 CCDC96Q2M329 555 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 NSMFQ6X4W1 530 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 SMC5Q8IY18 1101 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 TIFAQ96CG3 184 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 PURBQ96QR8 312 aaKnown RBP17.14■□□□□ 0.33
SPG7-205ENST00000561945 PBX4Q9BYU1 374 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
SPG7-205ENST00000561945 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
SPG7-205ENST00000561945 PTGS1P23219 599 aa17.13■□□□□ 0.33
SPG7-205ENST00000561945 CYP2C18P33260 490 aa17.13■□□□□ 0.33
SPG7-205ENST00000561945 AKNAD1Q5T1N1 836 aa17.13■□□□□ 0.33
SPG7-205ENST00000561945 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
SPG7-205ENST00000561945 VWCEQ96DN2 955 aa17.13■□□□□ 0.33
SPG7-205ENST00000561945 NOC4LQ9BVI4 516 aaKnown RBP17.13■□□□□ 0.33
SPG7-205ENST00000561945 PPP1R12CQ9BZL4 782 aa17.13■□□□□ 0.33
SPG7-205ENST00000561945 HIPK3Q9H422 1215 aa17.13■□□□□ 0.33
SPG7-205ENST00000561945 MYO9BQ13459 2157 aa17.12■□□□□ 0.33
SPG7-205ENST00000561945 B4GALT4O60513 344 aa17.12■□□□□ 0.33
SPG7-205ENST00000561945 KIAA1211Q6ZU35 1233 aa17.12■□□□□ 0.33
SPG7-205ENST00000561945 NOL8Q76FK4 1167 aaKnown RBP17.12■□□□□ 0.33
SPG7-205ENST00000561945 EEPD1Q7L9B9 569 aa17.12■□□□□ 0.33
SPG7-205ENST00000561945 TBC1D10CQ8IV04 446 aa17.12■□□□□ 0.33
SPG7-205ENST00000561945 RGS22Q8NE09 1264 aa17.12■□□□□ 0.33
SPG7-205ENST00000561945 DNERQ8NFT8 737 aa17.12■□□□□ 0.33
SPG7-205ENST00000561945 ACRP10323 421 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 PBX2P40425 430 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 PURAQ00577 322 aaKnown RBP17.11■□□□□ 0.33
SPG7-205ENST00000561945 GPATCH4Q5T3I0 446 aaKnown RBP17.11■□□□□ 0.33
SPG7-205ENST00000561945 SLC30A10Q6XR72 485 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 MFSD6Q6ZSS7 791 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 DGKHQ86XP1 1220 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 ANKS1AQ92625 1134 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 WDR11Q9BZH6 1224 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 WNT8AQ9H1J5 351 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 ALDH8A1Q9H2A2 487 aaPredicted RBP17.11■□□□□ 0.33
SPG7-205ENST00000561945 RNF41Q9H4P4 317 aaPredicted RBP17.11■□□□□ 0.33
SPG7-205ENST00000561945 POLR3EQ9NVU0 708 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 UMODL1Q5DID0 1318 aa17.11■□□□□ 0.33
SPG7-205ENST00000561945 FRMPD2Q68DX3 1309 aaPredicted RBP17.11■□□□□ 0.33
SPG7-205ENST00000561945 TANC1Q9C0D5 1861 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 GRXCR1A8MXD5 290 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 NKRFO15226 690 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPG7-205ENST00000561945 FGBP02675 491 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 SDSP20132 328 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 CPT1AP50416 773 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 MFAP1P55081 439 aaKnown RBP17.1■□□□□ 0.33
SPG7-205ENST00000561945 PSMC6P62333 389 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 RAB30Q15771 203 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
SPG7-205ENST00000561945 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 TRPV6Q9H1D0 765 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 GPCPD1Q9NPB8 672 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 TOMM22Q9NS69 142 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 CXXC1Q9P0U4 656 aaPredicted RBP17.1■□□□□ 0.33
SPG7-205ENST00000561945 MTMR7Q9Y216 660 aa17.1■□□□□ 0.33
SPG7-205ENST00000561945 A6NJR5 290 aa17.09■□□□□ 0.33
SPG7-205ENST00000561945 PFKMP08237 780 aa17.09■□□□□ 0.33
SPG7-205ENST00000561945 SUPT20HL2P0C7V6 817 aa17.09■□□□□ 0.33
SPG7-205ENST00000561945 HAND2P61296 217 aa17.09■□□□□ 0.33
SPG7-205ENST00000561945 RPS6P62753 249 aaKnown RBP17.09■□□□□ 0.33
SPG7-205ENST00000561945 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
SPG7-205ENST00000561945 ESR2Q92731 530 aa17.09■□□□□ 0.33
SPG7-205ENST00000561945 LNPKQ9C0E8 428 aa17.09■□□□□ 0.33
SPG7-205ENST00000561945 MTIF3Q9H2K0 278 aaKnown RBP17.09■□□□□ 0.33
SPG7-205ENST00000561945 KIAA1217Q5T5P2 1943 aa17.08■□□□□ 0.33
SPG7-205ENST00000561945 NEDD4P46934 1319 aa17.08■□□□□ 0.32
SPG7-205ENST00000561945 PTPDC1A2A3K4 754 aa17.08■□□□□ 0.32
SPG7-205ENST00000561945 RPUSD2Q8IZ73 545 aaKnown RBP17.08■□□□□ 0.32
SPG7-205ENST00000561945 USP38Q8NB14 1042 aa17.08■□□□□ 0.32
SPG7-205ENST00000561945 MPHOSPH6Q99547 160 aaKnown RBP17.08■□□□□ 0.32
SPG7-205ENST00000561945 KPNA6O60684 536 aa17.07■□□□□ 0.32
SPG7-205ENST00000561945 CALML3P27482 149 aa17.07■□□□□ 0.32
SPG7-205ENST00000561945 NUCB1Q02818 461 aa17.07■□□□□ 0.32
SPG7-205ENST00000561945 PTPN11Q06124 597 aaPredicted RBP17.07■□□□□ 0.32
SPG7-205ENST00000561945 CCDC178Q5BJE1 867 aa17.07■□□□□ 0.32
SPG7-205ENST00000561945 NFRKBQ6P4R8 1299 aa17.07■□□□□ 0.32
SPG7-205ENST00000561945 CHD1LQ86WJ1 897 aa17.07■□□□□ 0.32
SPG7-205ENST00000561945 SCFD2Q8WU76 684 aa17.07■□□□□ 0.32
SPG7-205ENST00000561945 SYMPKQ92797 1274 aaKnown RBP17.07■□□□□ 0.32
SPG7-205ENST00000561945 MTG1Q9BT17 334 aaPredicted RBP17.07■□□□□ 0.32
SPG7-205ENST00000561945 TNKSO95271 1327 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 TRIM6-TRIM34B2RNG4 842 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 RBAK-RBAKDNI3L0D1 243 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 ZNF213O14771 459 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 CCL23P55773 120 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 PDE4DQ08499 809 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 CCDC62Q6P9F0 684 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 OR6J1Q8NGC5 347 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 RWDD1Q9H446 243 aaPredicted RBP17.06■□□□□ 0.32
SPG7-205ENST00000561945 MSRAQ9UJ68 235 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 XIRP2A4UGR9 3374 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 SCN5AQ14524 2016 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 MYH6P13533 1939 aa17.06■□□□□ 0.32
SPG7-205ENST00000561945 RAD50Q92878 1312 aa17.05■□□□□ 0.32
SPG7-205ENST00000561945 B4DLN1 442 aa17.05■□□□□ 0.32
SPG7-205ENST00000561945 PITPNM1O00562 1244 aa17.05■□□□□ 0.32
SPG7-205ENST00000561945 MRPL12P52815 198 aaKnown RBP17.05■□□□□ 0.32
SPG7-205ENST00000561945 PPP2R5BQ15173 497 aa17.05■□□□□ 0.32
SPG7-205ENST00000561945 OTOP2Q7RTS6 562 aa17.05■□□□□ 0.32
SPG7-205ENST00000561945 PNMA1Q8ND90 353 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms