RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 TRIML1Q8N9V2 468 aa11.55□□□□□ -0.56
TUBGCP4-202ENST00000561691 SPC24Q8NBT2 197 aa11.55□□□□□ -0.56
TUBGCP4-202ENST00000561691 NLGN2Q8NFZ4 835 aa11.55□□□□□ -0.56
TUBGCP4-202ENST00000561691 CRYGNQ8WXF5 182 aa11.55□□□□□ -0.56
TUBGCP4-202ENST00000561691 TRIM5Q9C035 493 aa11.55□□□□□ -0.56
TUBGCP4-202ENST00000561691 CCSER1Q9C0I3 900 aa11.55□□□□□ -0.56
TUBGCP4-202ENST00000561691 TMX2Q9Y320 296 aa11.55□□□□□ -0.56
TUBGCP4-202ENST00000561691 ASTN2O75129 1339 aaPredicted RBP11.55□□□□□ -0.56
TUBGCP4-202ENST00000561691 GOLGA6L19H0YKK7 550 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 OR52Z1P0C646 297 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 ATP1A3P13637 1013 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 PSEN1P49768 467 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 CUL4BQ13620 913 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 KARSQ15046 597 aaKnown RBP11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 DTHD1Q6ZMT9 781 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 POTEDQ86YR6 584 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 IGSF22Q8N9C0 903 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 UPF1Q92900 1129 aaKnown RBP eCLIP11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 SMARCE1Q969G3 411 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 BECN2A8MW95 431 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 MEIS2O14770 477 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 NEMFO60524 1076 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 CCNT1O60563 726 aaKnown RBP11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 TDP2O95551 362 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 ZNF18P17022 549 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 TAL1P17542 331 aaPredicted RBP11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 PTGS1P23219 599 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 AFMP43652 599 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 HNRNPH2P55795 449 aaKnown RBP11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 SNAP25P60880 206 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 MYL5Q02045 173 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 IQUBQ8NA54 791 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 GLIS2Q9BZE0 524 aaPredicted RBP11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 VEZTQ9HBM0 779 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 DISC1Q9NRI5 854 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 SCAF8Q9UPN6 1271 aaKnown RBP11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 UTRNP46939 3433 aa11.54□□□□□ -0.56
TUBGCP4-202ENST00000561691 PPP1R3GB7ZBB8 358 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 BMP3P12645 472 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 RPS12P25398 132 aaKnown RBP11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 CAP2P40123 477 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 RAD51AP2Q09MP3 1159 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 NAA30Q147X3 362 aaPredicted RBP11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 KMT5BQ4FZB7 885 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 PPP4R3AQ6IN85 833 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 MLKLQ8NB16 471 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 STAMQ92783 540 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 MBOAT7Q96N66 472 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 BCS1LQ9Y276 419 aa11.53□□□□□ -0.56
TUBGCP4-202ENST00000561691 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 NOP2P46087 812 aaKnown RBP11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 GMPSP49915 693 aaPredicted RBP11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 RASA3Q14644 834 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 CCDC186Q7Z3E2 898 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 JDP2Q8WYK2 163 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 DPF2Q92785 391 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 HAS1Q92839 578 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 CUL5Q93034 780 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 GSDMAQ96QA5 445 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 PSTPIP2Q9H939 334 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 INTS13Q9NVM9 706 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 HOOK1Q9UJC3 728 aaKnown RBP11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 PAXBP1Q9Y5B6 917 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 PCDHA1Q9Y5I3 950 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 ZNF541Q9H0D2 1346 aa11.52□□□□□ -0.56
TUBGCP4-202ENST00000561691 USP17L15C9J2P7 530 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 USP17L13C9JLJ4 530 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 TMEM232C9JQI7 657 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 USP17L11C9JVI0 530 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 USP17L18D6R9N7 530 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 USP17L22D6RA61 530 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 USP17L17D6RBQ6 530 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 USP17L19D6RCP7 530 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 USP17L20D6RJB6 530 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 KLRC4O43908 158 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 USP17L24Q0WX57 530 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 ARID5BQ14865 1188 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 TNIP1Q15025 636 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 USP17L6PQ6QN14 398 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 APTXQ7Z2E3 356 aaKnown RBP11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 ENOX1Q8TC92 643 aaKnown RBP11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 AK8Q96MA6 479 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 XPO4Q9C0E2 1151 aaKnown RBP11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 BLZF1Q9H2G9 400 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 KBTBD4Q9NVX7 518 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 FANCLQ9NW38 375 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 PRR12Q9ULL5 1215 aa11.52□□□□□ -0.57
TUBGCP4-202ENST00000561691 CYP3A7-CYP3A51PA0A087WV96 503 aa11.51□□□□□ -0.57
TUBGCP4-202ENST00000561691 GOLGA6L6A8MZA4 724 aa11.51□□□□□ -0.57
TUBGCP4-202ENST00000561691 CYP3A7P24462 503 aa11.51□□□□□ -0.57
TUBGCP4-202ENST00000561691 LMOD1P29536 600 aaPredicted RBP11.51□□□□□ -0.57
TUBGCP4-202ENST00000561691 MRPL12P52815 198 aaKnown RBP11.51□□□□□ -0.57
TUBGCP4-202ENST00000561691 FANCCQ00597 558 aa11.51□□□□□ -0.57
TUBGCP4-202ENST00000561691 LRMPQ12912 555 aa11.51□□□□□ -0.57
TUBGCP4-202ENST00000561691 ZRSR1Q15695 479 aaKnown RBP11.51□□□□□ -0.57
TUBGCP4-202ENST00000561691 CCDC84Q86UT8 332 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms