RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 TBC1D5Q92609 795 aa24.06■■□□□ 1.44
TPM1-232ENST00000561425 GPHNQ9NQX3 736 aaPredicted RBP24.06■■□□□ 1.44
TPM1-232ENST00000561425 PDGFCQ9NRA1 345 aa24.06■■□□□ 1.44
TPM1-232ENST00000561425 MCM3APO60318 1980 aa24.05■■□□□ 1.44
TPM1-232ENST00000561425 A0A1W2PPC1 479 aa24.05■■□□□ 1.44
TPM1-232ENST00000561425 ZBTB5O15062 677 aa24.05■■□□□ 1.44
TPM1-232ENST00000561425 PRC1O43663 620 aa24.05■■□□□ 1.44
TPM1-232ENST00000561425 PPP1R11O60927 126 aaPredicted RBP24.05■■□□□ 1.44
TPM1-232ENST00000561425 CALML3P27482 149 aa24.05■■□□□ 1.44
TPM1-232ENST00000561425 ACLYP53396 1101 aa24.05■■□□□ 1.44
TPM1-232ENST00000561425 CASC1Q6TDU7 716 aa24.05■■□□□ 1.44
TPM1-232ENST00000561425 FERMT2Q96AC1 680 aa24.05■■□□□ 1.44
TPM1-232ENST00000561425 AMNQ9BXJ7 453 aa24.05■■□□□ 1.44
TPM1-232ENST00000561425 MRPL11Q9Y3B7 192 aaKnown RBP24.05■■□□□ 1.44
TPM1-232ENST00000561425 A0A1W2PQ45 241 aaPredicted RBP24.04■■□□□ 1.44
TPM1-232ENST00000561425 A0A1W2PQY0 241 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 SH2B2O14492 632 aaPredicted RBP24.04■■□□□ 1.44
TPM1-232ENST00000561425 OPLAHO14841 1288 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 MYCNP04198 464 aaPredicted RBP24.04■■□□□ 1.44
TPM1-232ENST00000561425 NEFLP07196 543 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 SMPD1P17405 629 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 SYN1P17600 705 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 SMARCA1P28370 1054 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 IRX5P78411 483 aaPredicted RBP24.04■■□□□ 1.44
TPM1-232ENST00000561425 KCNA10Q16322 511 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 CATIPQ7Z7H3 387 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 MCF2L2Q86YR7 1114 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 SYTL5Q8TDW5 730 aaPredicted RBP24.04■■□□□ 1.44
TPM1-232ENST00000561425 KCNB2Q92953 911 aa24.04■■□□□ 1.44
TPM1-232ENST00000561425 DDAH1O94760 285 aa24.03■■□□□ 1.44
TPM1-232ENST00000561425 RNF20Q5VTR2 975 aa24.03■■□□□ 1.44
TPM1-232ENST00000561425 FBXO16Q8IX29 292 aaPredicted RBP24.03■■□□□ 1.44
TPM1-232ENST00000561425 ZNF654Q8IZM8 581 aa24.03■■□□□ 1.44
TPM1-232ENST00000561425 SAMD3Q8N6K7 520 aa24.03■■□□□ 1.44
TPM1-232ENST00000561425 PCSK9Q8NBP7 692 aaKnown RBP24.03■■□□□ 1.44
TPM1-232ENST00000561425 MAP3K20Q9NYL2 800 aaKnown RBP24.03■■□□□ 1.44
TPM1-232ENST00000561425 DHX16O60231 1041 aaKnown RBP24.02■■□□□ 1.44
TPM1-232ENST00000561425 FXR1P51114 621 aaKnown RBP eCLIP24.02■■□□□ 1.44
TPM1-232ENST00000561425 EXOSC10Q01780 885 aaKnown RBP24.02■■□□□ 1.44
TPM1-232ENST00000561425 TRIM60Q495X7 471 aa24.02■■□□□ 1.44
TPM1-232ENST00000561425 EEPD1Q7L9B9 569 aa24.02■■□□□ 1.44
TPM1-232ENST00000561425 RASEFQ8IZ41 740 aa24.02■■□□□ 1.44
TPM1-232ENST00000561425 SPC25Q9HBM1 224 aa24.02■■□□□ 1.44
TPM1-232ENST00000561425 COL20A1Q9P218 1284 aa24.02■■□□□ 1.44
TPM1-232ENST00000561425 LRRC37A2A6NM11 1700 aa24.01■■□□□ 1.43
TPM1-232ENST00000561425 C6orf222P0C671 652 aaPredicted RBP24.01■■□□□ 1.43
TPM1-232ENST00000561425 MAGEA10P43363 369 aaPredicted RBP24.01■■□□□ 1.43
TPM1-232ENST00000561425 HSD17B4P51659 736 aa24.01■■□□□ 1.43
TPM1-232ENST00000561425 TMEM63BQ5T3F8 832 aa24.01■■□□□ 1.43
TPM1-232ENST00000561425 SGMS1Q86VZ5 419 aa24.01■■□□□ 1.43
TPM1-232ENST00000561425 NUP133Q8WUM0 1156 aa24.01■■□□□ 1.43
TPM1-232ENST00000561425 TAAR1Q96RJ0 339 aa24.01■■□□□ 1.43
TPM1-232ENST00000561425 PIGSQ96S52 555 aa24.01■■□□□ 1.43
TPM1-232ENST00000561425 ELP1O95163 1332 aa24.01■■□□□ 1.43
TPM1-232ENST00000561425 PNMA6FA0A0J9YX94 578 aa24■■□□□ 1.43
TPM1-232ENST00000561425 ASGR1P07306 291 aa24■■□□□ 1.43
TPM1-232ENST00000561425 CDK7P50613 346 aa24■■□□□ 1.43
TPM1-232ENST00000561425 TRAF1Q13077 416 aa24■■□□□ 1.43
TPM1-232ENST00000561425 DUSP28Q4G0W2 176 aa24■■□□□ 1.43
TPM1-232ENST00000561425 GNASQ5JWF2 1037 aa24■■□□□ 1.43
TPM1-232ENST00000561425 ANKRD33Q7Z3H0 272 aa24■■□□□ 1.43
TPM1-232ENST00000561425 TOX2Q96NM4 488 aa24■■□□□ 1.43
TPM1-232ENST00000561425 NEK1Q96PY6 1258 aa24■■□□□ 1.43
TPM1-232ENST00000561425 MPHOSPH6Q99547 160 aaKnown RBP24■■□□□ 1.43
TPM1-232ENST00000561425 SPZ1Q9BXG8 430 aa24■■□□□ 1.43
TPM1-232ENST00000561425 PPP4R2Q9NY27 417 aa24■■□□□ 1.43
TPM1-232ENST00000561425 ATP11BQ9Y2G3 1177 aa24■■□□□ 1.43
TPM1-232ENST00000561425 PCDHA1Q9Y5I3 950 aa24■■□□□ 1.43
TPM1-232ENST00000561425 B4DLN1 442 aa23.99■■□□□ 1.43
TPM1-232ENST00000561425 MRPL12P52815 198 aaKnown RBP23.99■■□□□ 1.43
TPM1-232ENST00000561425 TLE2Q04725 743 aa23.99■■□□□ 1.43
TPM1-232ENST00000561425 TLK2Q86UE8 772 aa23.99■■□□□ 1.43
TPM1-232ENST00000561425 NSUN6Q8TEA1 469 aaKnown RBP23.99■■□□□ 1.43
TPM1-232ENST00000561425 IWS1Q96ST2 819 aa23.99■■□□□ 1.43
TPM1-232ENST00000561425 DYNC1LI2O43237 492 aaPredicted RBP23.98■■□□□ 1.43
TPM1-232ENST00000561425 PTGS1P23219 599 aa23.98■■□□□ 1.43
TPM1-232ENST00000561425 KIF5BP33176 963 aa23.98■■□□□ 1.43
TPM1-232ENST00000561425 PDE4DQ08499 809 aa23.98■■□□□ 1.43
TPM1-232ENST00000561425 LZTS2Q9BRK4 669 aa23.98■■□□□ 1.43
TPM1-232ENST00000561425 MYL10Q9BUA6 226 aa23.98■■□□□ 1.43
TPM1-232ENST00000561425 WDR11Q9BZH6 1224 aa23.98■■□□□ 1.43
TPM1-232ENST00000561425 STARD7Q9NQZ5 370 aa23.98■■□□□ 1.43
TPM1-232ENST00000561425 CALM1P0DP23 149 aa23.97■■□□□ 1.43
TPM1-232ENST00000561425 CALM2P0DP24 149 aa23.97■■□□□ 1.43
TPM1-232ENST00000561425 CALM3P0DP25 149 aa23.97■■□□□ 1.43
TPM1-232ENST00000561425 GNAQP50148 359 aa23.97■■□□□ 1.43
TPM1-232ENST00000561425 FSCN1Q16658 493 aaKnown RBP23.97■■□□□ 1.43
TPM1-232ENST00000561425 ADCK5Q3MIX3 580 aa23.97■■□□□ 1.43
TPM1-232ENST00000561425 DHX32Q7L7V1 743 aaKnown RBP23.97■■□□□ 1.43
TPM1-232ENST00000561425 CTCFLQ8NI51 663 aaPredicted RBP23.97■■□□□ 1.43
TPM1-232ENST00000561425 GLT1D1Q96MS3 346 aa23.97■■□□□ 1.43
TPM1-232ENST00000561425 AP5M1Q9H0R1 490 aa23.97■■□□□ 1.43
TPM1-232ENST00000561425 PDLIM7Q9NR12 457 aa23.97■■□□□ 1.43
TPM1-232ENST00000561425 RANBP2P49792 3224 aaKnown RBP23.96■■□□□ 1.43
TPM1-232ENST00000561425 CCDC69A6NI79 296 aa23.96■■□□□ 1.43
TPM1-232ENST00000561425 HSPA4P34932 840 aa23.96■■□□□ 1.43
TPM1-232ENST00000561425 BEX3Q00994 111 aa23.96■■□□□ 1.43
TPM1-232ENST00000561425 KRT32Q14532 448 aa23.96■■□□□ 1.43
TPM1-232ENST00000561425 NOL8Q76FK4 1167 aaKnown RBP23.96■■□□□ 1.43
TPM1-232ENST00000561425 HOMER1Q86YM7 354 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms