RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SCAMP3O14828 347 aaKnown RBP4.42□□□□□ -1.7
SPG11-225ENST00000561391 TIAF1O95411 115 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 B3GALT4O96024 378 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 CELA3AP09093 270 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 DRD2P14416 443 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 ADMP35318 185 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 ZNF76P36508 570 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 CYP27A1Q02318 531 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 ZNF792Q3KQV3 632 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 RPS26P11Q5JNZ5 115 aaPredicted RBP4.42□□□□□ -1.7
SPG11-225ENST00000561391 FAM168AQ92567 244 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 NECAB3Q96P71 396 aaPredicted RBP4.42□□□□□ -1.7
SPG11-225ENST00000561391 TRIM56Q9BRZ2 755 aaKnown RBP4.42□□□□□ -1.7
SPG11-225ENST00000561391 BRIP1Q9BX63 1249 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 TMPRSS13Q9BYE2 586 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 SUGCTQ9HAC7 445 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 CBX8Q9HC52 389 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 GBA2Q9HCG7 927 aaPredicted RBP4.42□□□□□ -1.7
SPG11-225ENST00000561391 ZC3H7BQ9UGR2 993 aaKnown RBP4.42□□□□□ -1.7
SPG11-225ENST00000561391 GGT7Q9UJ14 662 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 PPM1HQ9ULR3 514 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.42□□□□□ -1.7
SPG11-225ENST00000561391 CD163L1Q9NR16 1453 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 AFDNP55196 1824 aaKnown RBP4.42□□□□□ -1.7
SPG11-225ENST00000561391 SLX4Q8IY92 1834 aa4.42□□□□□ -1.7
SPG11-225ENST00000561391 SMG6Q86US8 1419 aaKnown RBP4.41□□□□□ -1.7
SPG11-225ENST00000561391 LOC100289279A0A1B0GTE1 492 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 MINDY4BA8MYZ0 360 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 ENC1O14682 589 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 NPHP1O15259 732 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 PAGE1O75459 146 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 TCF3P15923 654 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 RAB6AP20340 208 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 ST13P50502 369 aaKnown RBP4.41□□□□□ -1.7
SPG11-225ENST00000561391 FANCCQ00597 558 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 STYK1Q6J9G0 422 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 ZNF574Q6ZN55 896 aaPredicted RBP4.41□□□□□ -1.7
SPG11-225ENST00000561391 HS2ST1Q7LGA3 356 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 OTOP1Q7RTM1 612 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 RTKN2Q8IZC4 609 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 STK11IPQ8N1F8 1099 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 RNF34Q969K3 372 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 MASTLQ96GX5 879 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 PGAP2Q9UHJ9 254 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 NARFQ9UHQ1 456 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 CACNA1SQ13698 1873 aa4.41□□□□□ -1.7
SPG11-225ENST00000561391 DLEC1Q9Y238 1755 aa4.4□□□□□ -1.7
SPG11-225ENST00000561391 MYH14Q7Z406 1995 aaKnown RBP4.4□□□□□ -1.7
SPG11-225ENST00000561391 KIAA0100Q14667 2235 aaKnown RBP4.4□□□□□ -1.7
SPG11-225ENST00000561391 CYP11A1P05108 521 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 SRGNP10124 158 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 MAOBP27338 520 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 HDLBPQ00341 1268 aaKnown RBP4.4□□□□□ -1.71
SPG11-225ENST00000561391 MAP7Q14244 749 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 POU4F3Q15319 338 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 PCNX4Q63HM2 1172 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 TTBK2Q6IQ55 1244 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 SV2BQ7L1I2 683 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 ZNF765Q7L2R6 523 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 RELL1Q8IUW5 271 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 SULF2Q8IWU5 870 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 STK35Q8TDR2 534 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 BCL7CQ8WUZ0 217 aaPredicted RBP4.4□□□□□ -1.71
SPG11-225ENST00000561391 KCNB2Q92953 911 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 ARMC5Q96C12 935 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 CORO1BQ9BR76 489 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 RC3H2Q9HBD1 1191 aaKnown RBP4.4□□□□□ -1.71
SPG11-225ENST00000561391 COPRSQ9NQ92 184 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 GPRC5DQ9NZD1 345 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 TLR6Q9Y2C9 796 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 PTPN22Q9Y2R2 807 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 SAMM50Q9Y512 469 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 NR2E3Q9Y5X4 410 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 CEP290O15078 2479 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 MAP3K19Q56UN5 1328 aa4.4□□□□□ -1.71
SPG11-225ENST00000561391 CENPJQ9HC77 1338 aaPredicted RBP4.4□□□□□ -1.71
SPG11-225ENST00000561391 FAM208AQ9UK61 1670 aaKnown RBP4.39□□□□□ -1.71
SPG11-225ENST00000561391 A0A1W2PPC1 479 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 ECEL1O95672 775 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 ARNTP27540 789 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 GBP2P32456 591 aaPredicted RBP4.39□□□□□ -1.71
SPG11-225ENST00000561391 PDE3AQ14432 1141 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 ZNF394Q53GI3 561 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 EXOSC6Q5RKV6 272 aaKnown RBP4.39□□□□□ -1.71
SPG11-225ENST00000561391 TBC1D9BQ66K14 1250 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 PRR5LQ6MZQ0 368 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 ATG4DQ86TL0 474 aaPredicted RBP4.39□□□□□ -1.71
SPG11-225ENST00000561391 RASAL3Q86YV0 1011 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 C2CD4AQ8NCU7 369 aaPredicted RBP4.39□□□□□ -1.71
SPG11-225ENST00000561391 GRIN3AQ8TCU5 1115 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 NOC4LQ9BVI4 516 aaKnown RBP4.39□□□□□ -1.71
SPG11-225ENST00000561391 KBTBD4Q9NVX7 518 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 PCDHGB7Q9Y5F8 929 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 RPTORQ8N122 1335 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 CLSPNQ9HAW4 1339 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 KDRP35968 1356 aa4.39□□□□□ -1.71
SPG11-225ENST00000561391 MON2Q7Z3U7 1717 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 VCANP13611 3396 aa4.38□□□□□ -1.71
SPG11-225ENST00000561391 LAMB4A4D0S4 1761 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms