RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 NAPAP54920 295 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 CUL4AQ13619 759 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 BAATQ14032 418 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-221ENST00000561276 GRB14Q14449 540 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 RNF207Q6ZRF8 634 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 OTOP1Q7RTM1 612 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 HSCBQ8IWL3 235 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 ZNF713Q8N859 430 aaPredicted RBP11.84□□□□□ -0.51
LRRC28-221ENST00000561276 USP6NLQ92738 828 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 PSTPIP2Q9H939 334 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 A1CFQ9NQ94 594 aaKnown RBP11.84□□□□□ -0.51
LRRC28-221ENST00000561276 CYP39A1Q9NYL5 469 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 SRRDQ9UH36 339 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 TRIM17Q9Y577 477 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 LCTP09848 1927 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 PFASO15067 1338 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 STK36Q9NRP7 1315 aa11.84□□□□□ -0.51
LRRC28-221ENST00000561276 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.51
LRRC28-221ENST00000561276 DNAJC25-GNG10A0A024R161 153 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 CYP2B6P20813 491 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 CALML3P27482 149 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 FLT3LGP49771 235 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 RPS6P62753 249 aaKnown RBP11.83□□□□□ -0.52
LRRC28-221ENST00000561276 HMGN5P82970 282 aaKnown RBP11.83□□□□□ -0.52
LRRC28-221ENST00000561276 PRKCZQ05513 592 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 MAP2K5Q13163 448 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 SAMD3Q8N6K7 520 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 CCDC12Q8WUD4 166 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-221ENST00000561276 WASF1Q92558 559 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 ALG1Q9BT22 464 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 MAF1Q9H063 256 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 PRDM10Q9NQV6 1147 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 SH3GLB2Q9NR46 395 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 MAP3K20Q9NYL2 800 aaKnown RBP11.83□□□□□ -0.52
LRRC28-221ENST00000561276 VPS54Q9P1Q0 977 aa11.83□□□□□ -0.52
LRRC28-221ENST00000561276 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-221ENST00000561276 GCOM1H8Y6P7 765 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-221ENST00000561276 MEIS2O14770 477 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 POLR2MP0CAP2 368 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 XBP1P17861 261 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 HOXA13P31271 388 aaPredicted RBP11.82□□□□□ -0.52
LRRC28-221ENST00000561276 RGS2P41220 211 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 HSD17B4P51659 736 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 MRPL12P52815 198 aaKnown RBP11.82□□□□□ -0.52
LRRC28-221ENST00000561276 PRMT2P55345 433 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 CNTN2Q02246 1040 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 USP17L6PQ6QN14 398 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 FAM184AQ8NB25 1140 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 NPLOC4Q8TAT6 608 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 SHISA4Q96DD7 197 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 PURBQ96QR8 312 aaKnown RBP11.82□□□□□ -0.52
LRRC28-221ENST00000561276 ZMYND12Q9H0C1 365 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 C6orf50Q9HD87 102 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 RIC8AQ9NPQ8 531 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 GJB4Q9NTQ9 266 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 SLC5A4Q9NY91 659 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 SMC3Q9UQE7 1217 aa11.82□□□□□ -0.52
LRRC28-221ENST00000561276 POTEB2H3BUK9 544 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 PIK3CDO00329 1044 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 XRCC5P13010 732 aaKnown RBP11.81□□□□□ -0.52
LRRC28-221ENST00000561276 GJB2P29033 226 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 ADCY7P51828 1080 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 NLRP5P59047 1200 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 GHRHRQ02643 423 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 ZNF792Q3KQV3 632 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 PPP1R18Q6NYC8 613 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 SLC30A10Q6XR72 485 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 CTU1Q7Z7A3 348 aaKnown RBP11.81□□□□□ -0.52
LRRC28-221ENST00000561276 FCHSD1Q86WN1 690 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 FAM133AQ8N9E0 248 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 RAET1EQ8TD07 263 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 SOCS4Q8WXH5 440 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 CUL5Q93034 780 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 INTS4Q96HW7 963 aaKnown RBP11.81□□□□□ -0.52
LRRC28-221ENST00000561276 TAAR1Q96RJ0 339 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 COL20A1Q9P218 1284 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 DIS3Q9Y2L1 958 aaKnown RBP11.81□□□□□ -0.52
LRRC28-221ENST00000561276 PTPN22Q9Y2R2 807 aa11.81□□□□□ -0.52
LRRC28-221ENST00000561276 ESYT2A0FGR8 921 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 SOWAHBA6NEL2 793 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 ADAMTS3O15072 1205 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 HOXC6P09630 235 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 GNA11P29992 359 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 FOSBP53539 338 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 IRF5Q13568 498 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 UBE2SQ16763 222 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 FAM177A1Q8N128 213 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-221ENST00000561276 CCDC148Q8NFR7 591 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 SYTL5Q8TDW5 730 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-221ENST00000561276 MAML3Q96JK9 1138 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 PHF20Q9BVI0 1012 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 GLT8D2Q9H1C3 349 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 BIN2Q9UBW5 565 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-221ENST00000561276 ADD3Q9UEY8 706 aaKnown RBP11.8□□□□□ -0.52
LRRC28-221ENST00000561276 KCNJ14Q9UNX9 436 aa11.8□□□□□ -0.52
LRRC28-221ENST00000561276 MCM3APO60318 1980 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 ADCY3O60266 1144 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 HSP90AA1P07900 732 aaKnown RBP11.79□□□□□ -0.52
LRRC28-221ENST00000561276 TRIM29Q14134 588 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms