RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PARP4Q9UKK3 1724 aaKnown RBP18.3■□□□□ 0.52
TPM1-228ENST00000560975 CAMTA1Q9Y6Y1 1673 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 ZNF572Q7Z3I7 529 aaPredicted RBP18.3■□□□□ 0.52
TPM1-228ENST00000560975 ZBTB38Q8NAP3 1195 aaPredicted RBP18.3■□□□□ 0.52
TPM1-228ENST00000560975 SCLT1Q96NL6 688 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
TPM1-228ENST00000560975 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
TPM1-228ENST00000560975 CYP2D7A0A087X1C5 515 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 RASSF7Q02833 373 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 PREPLQ4J6C6 727 aaPredicted RBP18.29■□□□□ 0.52
TPM1-228ENST00000560975 NAALADL2Q58DX5 795 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 ANKRD40Q6AI12 368 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 CCDC121Q6ZUS5 278 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 RUBCNQ92622 972 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 PYM1Q9BRP8 204 aaKnown RBP18.29■□□□□ 0.52
TPM1-228ENST00000560975 TLR10Q9BXR5 811 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 DISC1Q9NRI5 854 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.29■□□□□ 0.52
TPM1-228ENST00000560975 KLRC4O43908 158 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 RASSF9O75901 435 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 MAGEA1P43355 309 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 E2F5Q15329 346 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 SPRED3Q2MJR0 410 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 RASGRP4Q8TDF6 673 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 ESR2Q92731 530 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 ATP6V1G3Q96LB4 118 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 KRT12Q99456 494 aa18.29■□□□□ 0.52
TPM1-228ENST00000560975 FRMD3A2A2Y4 597 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 PAK2Q13177 524 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 CCDC178Q5BJE1 867 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 YTHDF3Q7Z739 585 aaKnown RBP18.28■□□□□ 0.52
TPM1-228ENST00000560975 IQCA1Q86XH1 822 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 RETREG2Q8NC44 543 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 MMRN2Q9H8L6 949 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 NUP188Q5SRE5 1749 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 GOLGA6L7A0A1B0GV03 622 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 PRLRP16471 622 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 MTMR8Q96EF0 704 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 ZSCAN10Q96SZ4 725 aaPredicted RBP18.28■□□□□ 0.52
TPM1-228ENST00000560975 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 PLAAQ9Y263 795 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 FAM107AO95990 144 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 MIIPQ5JXC2 388 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 OR2W6PQ8NHA6 318 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 CASKIN2Q8WXE0 1202 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 HPS3Q969F9 1004 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 CYFIP2Q96F07 1278 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 HAUS2Q9NVX0 235 aa18.28■□□□□ 0.52
TPM1-228ENST00000560975 GFPT1Q06210 699 aaPredicted RBP18.27■□□□□ 0.52
TPM1-228ENST00000560975 CFAP221Q4G0U5 840 aa18.27■□□□□ 0.52
TPM1-228ENST00000560975 RRAGAQ7L523 313 aa18.27■□□□□ 0.52
TPM1-228ENST00000560975 GIMAP8Q8ND71 665 aaPredicted RBP18.27■□□□□ 0.52
TPM1-228ENST00000560975 BCCIPQ9P287 314 aaKnown RBP eCLIP18.27■□□□□ 0.52
TPM1-228ENST00000560975 IQSEC3Q9UPP2 1182 aaPredicted RBP18.27■□□□□ 0.52
TPM1-228ENST00000560975 RCAN1P53805 252 aa18.27■□□□□ 0.51
TPM1-228ENST00000560975 TOM1L2Q6ZVM7 507 aa18.27■□□□□ 0.51
TPM1-228ENST00000560975 RPAINQ86UA6 219 aa18.27■□□□□ 0.51
TPM1-228ENST00000560975 KIRREL3Q8IZU9 778 aa18.27■□□□□ 0.51
TPM1-228ENST00000560975 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.51
TPM1-228ENST00000560975 P2RX5Q93086 422 aa18.27■□□□□ 0.51
TPM1-228ENST00000560975 GDF3Q9NR23 364 aa18.27■□□□□ 0.51
TPM1-228ENST00000560975 TNFRSF8P28908 595 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 LONP1P36776 959 aaKnown RBP18.26■□□□□ 0.51
TPM1-228ENST00000560975 ITGB3BPQ13352 177 aaPredicted RBP18.26■□□□□ 0.51
TPM1-228ENST00000560975 SNCBQ16143 134 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 KLHDC7AQ5VTJ3 777 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 DDX17Q92841 729 aaKnown RBP18.26■□□□□ 0.51
TPM1-228ENST00000560975 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 PACSIN2Q9UNF0 486 aaPredicted RBP18.26■□□□□ 0.51
TPM1-228ENST00000560975 PLAGL2Q9UPG8 496 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 GLI3P10071 1580 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 C21orf2O43822 256 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 FTCDO95954 541 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 FCER1AP12319 257 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 TMOD1P28289 359 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 UBA7P41226 1012 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 CTSWP56202 376 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 PDE4DQ08499 809 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 KIF6Q6ZMV9 814 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 PARP9Q8IXQ6 854 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 DHX37Q8IY37 1157 aaKnown RBP18.26■□□□□ 0.51
TPM1-228ENST00000560975 LRRC15Q8TF66 581 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 MIEF2Q96C03 454 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 PAGR1Q9BTK6 254 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 LRP2BPQ9P2M1 347 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 DDX20Q9UHI6 824 aaKnown RBP18.26■□□□□ 0.51
TPM1-228ENST00000560975 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
TPM1-228ENST00000560975 LRRC53A6NM62 1247 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 SLC1A4P43007 532 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 STK4Q13043 487 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 HLTFQ14527 1009 aaKnown RBP eCLIP18.25■□□□□ 0.51
TPM1-228ENST00000560975 PUM3Q15397 648 aaKnown RBP18.25■□□□□ 0.51
TPM1-228ENST00000560975 QPCTQ16769 361 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 PROCA1Q8NCQ7 364 aaPredicted RBP18.25■□□□□ 0.51
TPM1-228ENST00000560975 DNM1LO00429 736 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 RHOBTB3O94955 611 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 CDK17Q00537 523 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 HLFQ16534 295 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 CYB5D1Q6P9G0 228 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 C6orf89Q6UWU4 347 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms