RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 P2RX7Q99572 595 aaKnown RBP9.26□□□□□ -0.93
CPNE6-218ENST00000560845 SH2D4AQ9H788 454 aa9.26□□□□□ -0.93
CPNE6-218ENST00000560845 GDPD2Q9HCC8 539 aa9.26□□□□□ -0.93
CPNE6-218ENST00000560845 BRMS1Q9HCU9 246 aa9.26□□□□□ -0.93
CPNE6-218ENST00000560845 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
CPNE6-218ENST00000560845 RTN4Q9NQC3 1192 aaKnown RBP9.26□□□□□ -0.93
CPNE6-218ENST00000560845 VPS54Q9P1Q0 977 aa9.26□□□□□ -0.93
CPNE6-218ENST00000560845 TMEM63CQ9P1W3 806 aa9.26□□□□□ -0.93
CPNE6-218ENST00000560845 SEC63Q9UGP8 760 aaKnown RBP9.26□□□□□ -0.93
CPNE6-218ENST00000560845 KCNJ14Q9UNX9 436 aa9.26□□□□□ -0.93
CPNE6-218ENST00000560845 UNC80Q8N2C7 3258 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 CYTH3O43739 400 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 PRPF40AO75400 957 aaKnown RBP9.25□□□□□ -0.93
CPNE6-218ENST00000560845 NDUFB10O96000 172 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 MAPK4P31152 587 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 KRT2P35908 639 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 SLC1A4P43007 532 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 ERVK-9P63128 1117 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 ERVK-24P63145 666 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 CACNB2Q08289 660 aaPredicted RBP9.25□□□□□ -0.93
CPNE6-218ENST00000560845 LRRC26Q2I0M4 334 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 ZSCAN23Q3MJ62 389 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 HEATR3Q7Z4Q2 680 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 HOMER1Q86YM7 354 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 SIAH1Q8IUQ4 282 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 DIS3L2Q8IYB7 885 aaKnown RBP9.25□□□□□ -0.93
CPNE6-218ENST00000560845 CCDC148Q8NFR7 591 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 USP6NLQ92738 828 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 GMCL1Q96IK5 515 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 FEZ1Q99689 392 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 APBA2Q99767 749 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 CPVLQ9H3G5 476 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 GOPCQ9HD26 462 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 RRAGDQ9NQL2 400 aaPredicted RBP9.25□□□□□ -0.93
CPNE6-218ENST00000560845 TMX2Q9Y320 296 aa9.25□□□□□ -0.93
CPNE6-218ENST00000560845 PLXNB2O15031 1838 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 A0A1W2PRG0 241 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 C19orf81C9J6K1 198 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 F5H6K3 240 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 hCG_1984214I3L0E3 225 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 CCND3P30281 292 aaPredicted RBP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 RGS2P41220 211 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 KLRC3Q07444 240 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 CCL14Q16627 93 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 MORN1Q5T089 497 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 MYSM1Q5VVJ2 828 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 LHX8Q68G74 356 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 WWC2Q6AWC2 1192 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 ATL3Q6DD88 541 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 CAVIN1Q6NZI2 390 aaKnown RBP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 KCTD1Q719H9 257 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 GPR142Q7Z601 462 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 CCAR1Q8IX12 1150 aaKnown RBP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 FAM177A1Q8N128 213 aaPredicted RBP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 ZNF713Q8N859 430 aaPredicted RBP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 ACER1Q8TDN7 264 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 GTF3C2Q8WUA4 911 aaPredicted RBP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 GPKOWQ92917 476 aaPredicted RBP eCLIP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 PIGSQ96S52 555 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 PAGR1Q9BTK6 254 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 PHF20Q9BVI0 1012 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 SCAND2PQ9GZW5 306 aaPredicted RBP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 UBA5Q9GZZ9 404 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 PORCNQ9H237 461 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 FOXP1Q9H334 677 aaPredicted RBP9.24□□□□□ -0.93
CPNE6-218ENST00000560845 RIOX1Q9H6W3 641 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 VCPKMTQ9H867 229 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 SH3GLB2Q9NR46 395 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 RBPJLQ9UBG7 517 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 TCHHQ07283 1943 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 MYH4Q9Y623 1939 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 ATAD5Q96QE3 1844 aa9.24□□□□□ -0.93
CPNE6-218ENST00000560845 USP17L10C9JJH3 530 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 STXBP3O00186 592 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 MBD3O95983 291 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 BMP3P12645 472 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 U2AF2P26368 475 aaKnown RBP eCLIP9.23□□□□□ -0.93
CPNE6-218ENST00000560845 CALML3P27482 149 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 NAPAP54920 295 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 NLRP5P59047 1200 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 IKQ13123 557 aaPredicted RBP9.23□□□□□ -0.93
CPNE6-218ENST00000560845 Q3C1V9 767 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 TTBK2Q6IQ55 1244 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 POTEEQ6S8J3 1075 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 PLEKHH3Q7Z736 793 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 NOSTRINQ8IVI9 506 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 CCDC12Q8WUD4 166 aaPredicted RBP9.23□□□□□ -0.93
CPNE6-218ENST00000560845 LEO1Q8WVC0 666 aaPredicted RBP9.23□□□□□ -0.93
CPNE6-218ENST00000560845 SPATA32Q96LK8 384 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 USP28Q96RU2 1077 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
CPNE6-218ENST00000560845 VAT1LQ9HCJ6 419 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 BARHL2Q9NY43 387 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 ELP1O95163 1332 aa9.23□□□□□ -0.93
CPNE6-218ENST00000560845 BTBD18B2RXH4 712 aa9.22□□□□□ -0.93
CPNE6-218ENST00000560845 GADD45BO75293 160 aaPredicted RBP9.22□□□□□ -0.93
CPNE6-218ENST00000560845 SLC16A2P36021 539 aa9.22□□□□□ -0.93
CPNE6-218ENST00000560845 MAP2K5Q13163 448 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms