RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 CPA4Q9UI42 421 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 RABGAP1Q9Y3P9 1069 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 HTTP42858 3142 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 PNMA6FA0A0J9YX94 578 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 STXBP3O00186 592 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 CPLX1O14810 134 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 OPLAHO14841 1288 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 PRPF3O43395 683 aaKnown RBP8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 CDKL5O76039 1030 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 MAP2K5Q13163 448 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 PFKFB3Q16875 520 aaPredicted RBP8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 SNRNP48Q6IEG0 339 aaKnown RBP8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 TYW1BQ6NUM6 668 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 CPLX2Q6PUV4 134 aaKnown RBP8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 C17orf99Q6UX52 265 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 RIOX2Q8IUF8 465 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 ANKRD13CQ8N6S4 541 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 JMYQ8N9B5 988 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 GPKOWQ92917 476 aaPredicted RBP eCLIP8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 RRP36Q96EU6 259 aaKnown RBP8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 AGBL1Q96MI9 1066 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 TEX13BQ9BXU2 312 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 SPATC1LQ9H0A9 340 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 ZFYVE28Q9HCC9 887 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 VAT1LQ9HCJ6 419 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 HOXC10Q9NYD6 342 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 CCPG1Q9ULG6 757 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 RBM19Q9Y4C8 960 aaKnown RBP8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 RIPK3Q9Y572 518 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 CASP8AP2Q9UKL3 1982 aa8.13□□□□□ -1.11
CTDSPL2-210ENST00000560834 ABCB11O95342 1321 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 ZBED4O75132 1171 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 TRPA1O75762 1119 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 DEXIO95424 95 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 TBC1D8O95759 1140 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 SCG2P13521 617 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 HMGN5P82970 282 aaKnown RBP8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 CAP1Q01518 475 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 MAP2K1Q02750 393 aaPredicted RBP8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 SSRP1Q08945 709 aaKnown RBP8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 Q3C1V9 767 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 USH1GQ495M9 461 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 MUM1L1Q5H9M0 696 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 PPP1R18Q6NYC8 613 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 HEATR3Q7Z4Q2 680 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 FBXO11Q86XK2 927 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 TRIM22Q8IYM9 498 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 CPXCR1Q8N123 301 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 CLEC4DQ8WXI8 215 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 COA7Q96BR5 231 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 DDX11Q96FC9 970 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 INTS4Q96HW7 963 aaKnown RBP8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 AMNQ9BXJ7 453 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 MOV10L1Q9BXT6 1211 aaKnown RBP8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 PORCNQ9H237 461 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 WBP1LQ9NX94 342 aa8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 RBM27Q9P2N5 1060 aaKnown RBP8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 ORC3Q9UBD5 711 aaPredicted RBP8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 SEC63Q9UGP8 760 aaKnown RBP8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 V9GY48 417 aaPredicted RBP8.12□□□□□ -1.11
CTDSPL2-210ENST00000560834 hCG_1984214I3L0E3 225 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 NFIBO00712 420 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 ADAMTS3O15072 1205 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 GJB2P29033 226 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 CTGFP29279 349 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 ANP32AP39687 249 aaKnown RBP8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 STAT3P40763 770 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 GHRHRQ02643 423 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 PLS1Q14651 629 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 NPY5RQ15761 445 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 ZNF713Q8N859 430 aaPredicted RBP8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 SHCBP1Q8NEM2 672 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 GPRC5AQ8NFJ5 357 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 ALG1Q9BT22 464 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 EFCC1Q9HA90 598 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 GJB4Q9NTQ9 266 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 RNF146Q9NTX7 359 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 BARHL2Q9NY43 387 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 VPS54Q9P1Q0 977 aa8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 ZNFX1Q9P2E3 1918 aaKnown RBP8.11□□□□□ -1.11
CTDSPL2-210ENST00000560834 ESYT2A0FGR8 921 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 EVI5O60447 810 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 SLC25A27O95847 323 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 ALAS1P13196 640 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 ERCC3P19447 782 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 COPB2P35606 906 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 FOSBP53539 338 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 NAPAP54920 295 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 AKAP17AQ02040 695 aaKnown RBP8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 BECN1Q14457 450 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 HIC1Q14526 733 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 TKFCQ3LXA3 575 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 SLC30A10Q6XR72 485 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 PTCD2Q8WV60 388 aaKnown RBP8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 DDX12PQ92771 950 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 TRERF1Q96PN7 1200 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 ARHGAP39Q9C0H5 1083 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 ACAD9Q9H845 621 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms