RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CNKSR1Q969H4 720 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 IQCDQ96DY2 449 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 ERO1AQ96HE7 468 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 DHTKD1Q96HY7 919 aaPredicted RBP10.93□□□□□ -0.66
RTF1-206ENST00000560447 MED15Q96RN5 788 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 BAG1Q99933 345 aaPredicted RBP10.93□□□□□ -0.66
RTF1-206ENST00000560447 C7orf25Q9BPX7 421 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 THAP9Q9H5L6 903 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 RIC8AQ9NPQ8 531 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 NYAP2Q9P242 653 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 SERPINA10Q9UK55 444 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
RTF1-206ENST00000560447 ATRNL1Q5VV63 1379 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 BICDL2A1A5D9 508 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 USP17L5A8MUK1 530 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 TMEM232C9JQI7 657 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 H0YIN7 160 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 PSMA7O14818 248 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 SHMT1P34896 483 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 CRKP46108 304 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 MRPL12P52815 198 aaKnown RBP10.92□□□□□ -0.66
RTF1-206ENST00000560447 FOXK1P85037 733 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 TRAF1Q13077 416 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 SEPT2Q15019 361 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 NAALADL2Q58DX5 795 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 PPP4R3AQ6IN85 833 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 APOBEC3HQ6NTF7 200 aaKnown RBP10.92□□□□□ -0.66
RTF1-206ENST00000560447 USP17L2Q6R6M4 530 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 ADSSL1Q8N142 457 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 TC2NQ8N9U0 490 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 GIMAP8Q8ND71 665 aaPredicted RBP10.92□□□□□ -0.66
RTF1-206ENST00000560447 CALML4Q96GE6 196 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 PIGSQ96S52 555 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 TMEM60Q9H2L4 133 aa10.92□□□□□ -0.66
RTF1-206ENST00000560447 SAMSN1Q9NSI8 373 aaKnown RBP10.92□□□□□ -0.66
RTF1-206ENST00000560447 SLX4Q8IY92 1834 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 ABCB11O95342 1321 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 PVALEFA0A1B0GWK0 134 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 A0A1W2PQC6 194 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 USP27XA6NNY8 438 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 KLRC4O43908 158 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 ENTPD3O75355 529 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 SLU7O95391 586 aaKnown RBP10.91□□□□□ -0.66
RTF1-206ENST00000560447 APBA3O96018 575 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 MMP10P09238 476 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 GOLGA8HP0CJ92 632 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 AKR1B1P15121 316 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 CLK2P49760 499 aaKnown RBP10.91□□□□□ -0.66
RTF1-206ENST00000560447 SLC4A8Q2Y0W8 1093 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 MOXD1Q6UVY6 613 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 SLC51AQ86UW1 340 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 FAM114A1Q8IWE2 563 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 TRMT44Q8IYL2 757 aaKnown RBP10.91□□□□□ -0.66
RTF1-206ENST00000560447 RASSF8Q8NHQ8 419 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 RASGRP4Q8TDF6 673 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 NELFBQ8WX92 580 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 CUL5Q93034 780 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 MTMR9Q96QG7 549 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 MTRQ99707 1265 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 KANSL2Q9H9L4 492 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 DDX4Q9NQI0 724 aaKnown RBP10.91□□□□□ -0.66
RTF1-206ENST00000560447 RYDENQ9NUL5 291 aaKnown RBP10.91□□□□□ -0.66
RTF1-206ENST00000560447 PI4KBQ9UBF8 816 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 CTNND2Q9UQB3 1225 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 PCDHGA4Q9Y5G9 962 aa10.91□□□□□ -0.66
RTF1-206ENST00000560447 SCN9AQ15858 1988 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 MYH7BA7E2Y1 1941 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 ZBTB5O15062 677 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 ADAMTS3O15072 1205 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 CCNT1O60563 726 aaKnown RBP10.9□□□□□ -0.66
RTF1-206ENST00000560447 COPB1P53618 953 aaKnown RBP10.9□□□□□ -0.66
RTF1-206ENST00000560447 PICALMQ13492 652 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 TUBB2AQ13885 445 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 KARSQ15046 597 aaKnown RBP10.9□□□□□ -0.66
RTF1-206ENST00000560447 LETM2Q2VYF4 491 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 GLIPR1L2Q4G1C9 344 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 TCP11X2Q5H9J9 407 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 DACT2Q5SW24 774 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 KLHL10Q6JEL2 608 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 C2CD5Q86YS7 1000 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 REXO1L1PQ8IX06 675 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 TBCKQ8TEA7 893 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 TUBB2BQ9BVA1 445 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 VPS33BQ9H267 617 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 JMJD4Q9H9V9 463 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 TRMT1Q9NXH9 659 aaKnown RBP10.9□□□□□ -0.66
RTF1-206ENST00000560447 CGNQ9P2M7 1197 aaKnown RBP10.9□□□□□ -0.66
RTF1-206ENST00000560447 PPP2R2CQ9Y2T4 447 aa10.9□□□□□ -0.66
RTF1-206ENST00000560447 KDM3AQ9Y4C1 1321 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 KCNJ18B7U540 433 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 MFAP3LO75121 409 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 CCDC175P0C221 793 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 PLCG1P19174 1290 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 CCNE1P24864 410 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 PSMD2Q13200 908 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 AP3B2Q13367 1082 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 KCNJ12Q14500 433 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 KRT31Q15323 416 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 CALCRLQ16602 461 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 KMT5BQ4FZB7 885 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms