RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 CTNNA3Q9UI47 895 aa11.05□□□□□ -0.64
SMAD3-215ENST00000560424 TRANK1O15050 2925 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 LCHNA4D1U4 455 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 GRXCR2A6NFK2 248 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 PRKAB2O43741 272 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 PTGS1P23219 599 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 CHMP4BP1P59074 171 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 WDR5P61964 334 aaKnown RBP11.04□□□□□ -0.64
SMAD3-215ENST00000560424 PTPROQ16827 1216 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 CEP85Q6P2H3 762 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 SPRED2Q7Z698 418 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 SIRT2Q8IXJ6 389 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 FAM133AQ8N9E0 248 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 MTG1Q9BT17 334 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-215ENST00000560424 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.04□□□□□ -0.64
SMAD3-215ENST00000560424 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 SUGCTQ9HAC7 445 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 VTA1Q9NP79 307 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 A1CFQ9NQ94 594 aaKnown RBP11.04□□□□□ -0.64
SMAD3-215ENST00000560424 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 NYAP2Q9P242 653 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 ARPP21Q9UBL0 812 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-215ENST00000560424 CLIP2Q9UDT6 1046 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 NOP58Q9Y2X3 529 aaKnown RBP11.04□□□□□ -0.64
SMAD3-215ENST00000560424 SLC4A4Q9Y6R1 1079 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 TANC1Q9C0D5 1861 aa11.04□□□□□ -0.64
SMAD3-215ENST00000560424 BRWD1Q9NSI6 2320 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 SOWAHBA6NEL2 793 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 H3BQ06 376 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-215ENST00000560424 ALAS1P13196 640 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 PTPN5P54829 565 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
SMAD3-215ENST00000560424 FOXK2Q01167 660 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 LRRFIP1Q32MZ4 808 aaKnown RBP11.03□□□□□ -0.64
SMAD3-215ENST00000560424 NBPF20Q3BBV1 942 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 TKFCQ3LXA3 575 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 NFRKBQ6P4R8 1299 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 HFE2Q6ZVN8 426 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 STK11IPQ8N1F8 1099 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 OR6J1Q8NGC5 347 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 RAD9AQ99638 391 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 PRRX2Q99811 253 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 C1orf115Q9H7X2 142 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 PRKAG3Q9UGI9 489 aa11.03□□□□□ -0.64
SMAD3-215ENST00000560424 TCRBV5S4A2TA0A5A2 114 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 HMMRO75330 724 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 BMP3P12645 472 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 STAT2P52630 851 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 ERVK-21P61565 698 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 DUSP28Q4G0W2 176 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 TIGD5Q53EQ6 642 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 TAPT1Q6NXT6 567 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 FAM117BQ6P1L5 589 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 CNKSR3Q6P9H4 555 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 TMCO2Q7Z6W1 182 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-215ENST00000560424 AFAP1L1Q8TED9 768 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 ZNF287Q9HBT7 754 aa11.02□□□□□ -0.65
SMAD3-215ENST00000560424 ADD3Q9UEY8 706 aaKnown RBP11.02□□□□□ -0.65
SMAD3-215ENST00000560424 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 LINC01553A4QN01 128 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 TMEM232C9JQI7 657 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 KPNA6O60684 536 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 EFCAB14O75071 495 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 GJB5O95377 273 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 PARNO95453 639 aaKnown RBP11.01□□□□□ -0.65
SMAD3-215ENST00000560424 IFIT2P09913 472 aaKnown RBP11.01□□□□□ -0.65
SMAD3-215ENST00000560424 DEFB103AP81534 67 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 ZP2Q05996 745 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 PTPN11Q06124 597 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-215ENST00000560424 PTGISQ16647 500 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 HSP90AB4PQ58FF6 505 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 CTR9Q6PD62 1173 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 NSMFQ6X4W1 530 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 FAM160B2Q86V87 743 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 SUGP1Q8IWZ8 645 aaKnown RBP11.01□□□□□ -0.65
SMAD3-215ENST00000560424 ZNF444Q8N0Y2 327 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-215ENST00000560424 CLASRPQ8N2M8 674 aaKnown RBP11.01□□□□□ -0.65
SMAD3-215ENST00000560424 CAGE1Q8TC20 777 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 CHURC1Q8WUH1 139 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 MPHOSPH6Q99547 160 aaKnown RBP11.01□□□□□ -0.65
SMAD3-215ENST00000560424 POP1Q99575 1024 aaKnown RBP11.01□□□□□ -0.65
SMAD3-215ENST00000560424 DCTPP1Q9H773 170 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 IL1RAPL2Q9NP60 686 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 PAG1Q9NWQ8 432 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 EXOC6BQ9Y2D4 811 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 MYH4Q9Y623 1939 aa11.01□□□□□ -0.65
SMAD3-215ENST00000560424 SIP14410 1827 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 MINDY4BA8MYZ0 360 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 GFRA3O60609 400 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 TTLL1O95922 423 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 RASA1P20936 1047 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 ADD2P35612 726 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 NUCB1Q02818 461 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 IKBKEQ14164 716 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 SLFN13Q68D06 897 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 LRRC8DQ7L1W4 858 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms