RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 HSPA1BP0DMV9 641 aaKnown RBP15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 CRLF3Q8IUI8 442 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 NFE2L3Q9Y4A8 694 aa15.02□□□□□ -0.01
CSPG4P12-202ENST00000559989 IFNAR2P48551 515 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 RAPGEF5Q92565 580 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 ADPGKQ9BRR6 497 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 SLC8A2Q9UPR5 921 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 WDR97A6NE52 1622 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 A0A087WUV0 522 aaPredicted RBP15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 CEP55Q53EZ4 464 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 FSCBQ5H9T9 825 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 FRA10AC1Q70Z53 315 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 TAGAPQ8N103 731 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 FLCNQ8NFG4 579 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 SLC5A4Q9NY91 659 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 SUN2Q9UH99 717 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 ADAMTS2O95450 1211 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 FAM102BQ5T8I3 360 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 SZRD1Q7Z422 152 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 DYDC2Q96IM9 177 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 PDE11AQ9HCR9 933 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 NLRC4Q9NPP4 1024 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 LRWD1Q9UFC0 647 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 JRKLQ9Y4A0 524 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 H0Y626 953 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 TRIM16O95361 564 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 ARHGEF1Q92888 912 aaKnown RBP15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 BCL2L12Q9HB09 334 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 WDR47O94967 919 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 PAMP19021 973 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 GUCY2DQ02846 1103 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 NELFCDQ8IXH7 590 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 B4GALNT2Q8NHY0 566 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 SRGAP2CP0DJJ0 459 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 NFKBIAP25963 317 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 MORC3Q14149 939 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 SPOPLQ6IQ16 392 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 ADAT2Q7Z6V5 191 aaKnown RBP15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 NGLY1Q96IV0 654 aa15.01□□□□□ -0.01
CSPG4P12-202ENST00000559989 ICA1LQ8NDH6 482 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 PYGMP11217 842 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 CYP2J2P51589 502 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 AP2B1P63010 937 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 PPP6R3Q5H9R7 873 aaPredicted RBP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 OTUB1Q96FW1 271 aaPredicted RBP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 CYTH2Q99418 400 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 MT-ND3P03897 115 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 PMLP29590 882 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 ADKP55263 362 aaKnown RBP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 AFAP1Q8N556 730 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 DNAAF3Q8N9W5 541 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 CCDC90BQ9GZT6 254 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 TCF3P15923 654 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 AARSP49588 968 aaKnown RBP eCLIP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 RAB14P61106 215 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 FOXD4Q12950 439 aaPredicted RBP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 DMP1Q13316 513 aaPredicted RBP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 TTLL11Q8NHH1 800 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 ARHGAP45Q92619 1136 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 MECOMQ03112 1051 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 JARID2Q92833 1246 aaPredicted RBP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 RBM17Q96I25 401 aaKnown RBP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 CHPF2Q9P2E5 772 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 SUGT1Q9Y2Z0 365 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 SCG2P13521 617 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 SPATA17Q96L03 361 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 PARP3Q9Y6F1 533 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 TLR3O15455 904 aaKnown RBP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 ANP32DO95626 131 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 SLFN14P0C7P3 912 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 PPP2R5BQ15173 497 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 PPP1R2P3Q6NXS1 205 aa15□□□□□ -0.01
CSPG4P12-202ENST00000559989 PPHLN1Q8NEY8 458 aaKnown RBP15□□□□□ -0.01
CSPG4P12-202ENST00000559989 ATP8B1O43520 1251 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 HDDC2Q7Z4H3 204 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 NIP7Q9Y221 180 aaKnown RBP eCLIP14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 ZNF711Q9Y462 761 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 ZNF644Q9H582 1327 aaPredicted RBP14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 DEAF1O75398 565 aaPredicted RBP14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 ALDH1L1O75891 902 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 CHGBP05060 677 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 EPHB4P54760 987 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 ATP8B2P98198 1209 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 C16orf72Q14CZ0 275 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 TEKT4Q8WW24 435 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 KDRP35968 1356 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 IQANK1A0A1B0GTG1 560 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 ALS2CLQ60I27 953 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 KCTD16Q68DU8 428 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 MCTP2Q6DN12 878 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 RINLQ6ZS11 566 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 NLRX1Q86UT6 975 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 UHMK1Q8TAS1 419 aaKnown RBP14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 DTNBP1Q96EV8 351 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 MAST3O60307 1309 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 ESRRBO95718 433 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 TPH2Q8IWU9 490 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 IGHDP01880 384 aa14.99□□□□□ -0.01
CSPG4P12-202ENST00000559989 DDX5P17844 614 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms