RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 TRIM29Q14134 588 aa13.27□□□□□ -0.28
TM2D3-208ENST00000559891 JAKMIP3Q5VZ66 844 aa13.27□□□□□ -0.28
TM2D3-208ENST00000559891 FTOQ9C0B1 505 aaKnown RBP eCLIP13.27□□□□□ -0.28
TM2D3-208ENST00000559891 PSTPIP2Q9H939 334 aa13.27□□□□□ -0.28
TM2D3-208ENST00000559891 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.28
TM2D3-208ENST00000559891 COL20A1Q9P218 1284 aa13.27□□□□□ -0.28
TM2D3-208ENST00000559891 M0R2N6 131 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 HSPA6P17066 643 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 PDCP20941 246 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 ERVK-9P63128 1117 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 ERVK-24P63145 666 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 RESTQ13127 1097 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 TNFRSF25Q93038 417 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.29
TM2D3-208ENST00000559891 TEX13BQ9BXU2 312 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 SH3GLB2Q9NR46 395 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 RNF146Q9NTX7 359 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 PCDHA6Q9UN73 950 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 SLC45A1Q9Y2W3 748 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 PCDHA8Q9Y5H6 950 aa13.27□□□□□ -0.29
TM2D3-208ENST00000559891 ADGRA2Q96PE1 1338 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 F13A1P00488 732 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 ERCC3P19447 782 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 CAP1Q01518 475 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 SREBF2Q12772 1141 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 SLC30A10Q6XR72 485 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 NCAPG2Q86XI2 1143 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 BLIDQ8IZY5 108 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 PARK7Q99497 189 aaKnown RBP13.26□□□□□ -0.29
TM2D3-208ENST00000559891 PNMA3Q9UL41 463 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 PCDHA4Q9UN74 947 aa13.26□□□□□ -0.29
TM2D3-208ENST00000559891 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 EDIL3O43854 480 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 ADCY7P51828 1080 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 INHBEP58166 350 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 UBXN2AP68543 259 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 NSMFQ6X4W1 530 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 FCHSD1Q86WN1 690 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 SYAP1Q96A49 352 aaPredicted RBP13.25□□□□□ -0.29
TM2D3-208ENST00000559891 RIC8AQ9NPQ8 531 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 ZKSCAN5Q9Y2L8 839 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 RABGAP1Q9Y3P9 1069 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 KIF3AQ9Y496 699 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 TRPA1O75762 1119 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 WDR78Q5VTH9 848 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 PIK3AP1Q6ZUJ8 805 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 C6orf50Q9HD87 102 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 ZSWIM8A7E2V4 1837 aa13.25□□□□□ -0.29
TM2D3-208ENST00000559891 DOCK3Q8IZD9 2030 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 TLR2O60603 784 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 XBP1P17861 261 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 ATP2B1P20020 1258 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 U2AF2P26368 475 aaKnown RBP eCLIP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 CTGFP29279 349 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 KRT2P35908 639 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 CLK2P49760 499 aaKnown RBP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 RPS6P62753 249 aaKnown RBP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 BAATQ14032 418 aaPredicted RBP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 RIOX2Q8IUF8 465 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 CCDC148Q8NFR7 591 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 A1CFQ9NQ94 594 aaKnown RBP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 CCDC39Q9UFE4 941 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 TSKSQ9UJT2 592 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 ABCB11O95342 1321 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 HTTP42858 3142 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 ESYT2A0FGR8 921 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 hCG_1984214I3L0E3 225 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 FDX1P10109 184 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 BCRP11274 1271 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 CALML3P27482 149 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 TOB1P50616 345 aaPredicted RBP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 OAZ1P54368 228 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 CEBPZQ03701 1054 aaKnown RBP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 C17orf99Q6UX52 265 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 ZNF713Q8N859 430 aaPredicted RBP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 GPRC5AQ8NFJ5 357 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 CUL5Q93034 780 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 RNF186Q9NXI6 227 aa13.24□□□□□ -0.29
TM2D3-208ENST00000559891 TFIP11Q9UBB9 837 aaKnown RBP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 MRPL11Q9Y3B7 192 aaKnown RBP13.24□□□□□ -0.29
TM2D3-208ENST00000559891 TCHHQ07283 1943 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 BRCA2P51587 3418 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 PGK2P07205 417 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
TM2D3-208ENST00000559891 CNTN2Q02246 1040 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 INF2Q27J81 1249 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 NOSTRINQ8IVI9 506 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 REXO1Q8N1G1 1221 aaKnown RBP13.23□□□□□ -0.29
TM2D3-208ENST00000559891 DAGLBQ8NCG7 672 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 UIMC1Q96RL1 719 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 ARHGAP39Q9C0H5 1083 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 TSPY26PQ9H489 355 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 ASTN1O14525 1302 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 LCTP09848 1927 aa13.23□□□□□ -0.29
TM2D3-208ENST00000559891 CA12O43570 354 aa13.22□□□□□ -0.29
TM2D3-208ENST00000559891 GNA11P29992 359 aa13.22□□□□□ -0.29
TM2D3-208ENST00000559891 DNM1Q05193 864 aaKnown RBP13.22□□□□□ -0.29
TM2D3-208ENST00000559891 GNL2Q13823 731 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms