RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 MOV10L1Q9BXT6 1211 aaKnown RBP11.94□□□□□ -0.5
TPM1-221ENST00000559831 ACAD9Q9H845 621 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 ZCCHC17Q9NP64 241 aaKnown RBP11.94□□□□□ -0.5
TPM1-221ENST00000559831 LCTP09848 1927 aa11.94□□□□□ -0.5
TPM1-221ENST00000559831 M0R2N6 131 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 MEIS2O14770 477 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 TM4SF4P48230 202 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 VEGFBP49765 207 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 DNM1Q05193 864 aaKnown RBP11.93□□□□□ -0.5
TPM1-221ENST00000559831 Q3C1V9 767 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 EARS2Q5JPH6 523 aaKnown RBP11.93□□□□□ -0.5
TPM1-221ENST00000559831 WDR78Q5VTH9 848 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 FCHSD1Q86WN1 690 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 CHST13Q8NET6 341 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 GPRC5AQ8NFJ5 357 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 ZFYVE28Q9HCC9 887 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 CPA4Q9UI42 421 aa11.93□□□□□ -0.5
TPM1-221ENST00000559831 NOL7Q9UMY1 257 aaKnown RBP11.93□□□□□ -0.5
TPM1-221ENST00000559831 MGAMO43451 1857 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 PLXNA1Q9UIW2 1896 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 SPDYE3A6NKU9 549 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 SLC25A27O95847 323 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 ERCC3P19447 782 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 COPB2P35606 906 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 CLK2P49760 499 aaKnown RBP11.92□□□□□ -0.5
TPM1-221ENST00000559831 CCNA1P78396 465 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 CEBPZQ03701 1054 aaKnown RBP11.92□□□□□ -0.5
TPM1-221ENST00000559831 NONOQ15233 471 aaKnown RBP eCLIP11.92□□□□□ -0.5
TPM1-221ENST00000559831 INF2Q27J81 1249 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 SLC30A10Q6XR72 485 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 RNF207Q6ZRF8 634 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 CCAR1Q8IX12 1150 aaKnown RBP11.92□□□□□ -0.5
TPM1-221ENST00000559831 ZNF396Q96N95 335 aaPredicted RBP11.92□□□□□ -0.5
TPM1-221ENST00000559831 ANO3Q9BYT9 981 aa11.92□□□□□ -0.5
TPM1-221ENST00000559831 ADGRA2Q96PE1 1338 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 THSD7BQ9C0I4 1608 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 PIK3CDO00329 1044 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 ECM2O94769 699 aaPredicted RBP11.91□□□□□ -0.5
TPM1-221ENST00000559831 BAG4O95429 457 aaKnown RBP11.91□□□□□ -0.5
TPM1-221ENST00000559831 FOSP01100 380 aaPredicted RBP11.91□□□□□ -0.5
TPM1-221ENST00000559831 HSD17B4P51659 736 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 KRT85P78386 507 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 CRHR2Q13324 411 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 AP3B2Q13367 1082 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 BAATQ14032 418 aaPredicted RBP11.91□□□□□ -0.5
TPM1-221ENST00000559831 NBR1Q14596 966 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
TPM1-221ENST00000559831 ANKRD35Q8N283 1001 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 TBCKQ8TEA7 893 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 FTOQ9C0B1 505 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM1-221ENST00000559831 R3HDMLQ9H3Y0 253 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 EHMT1Q9H9B1 1298 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 EFCC1Q9HA90 598 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 TFIP11Q9UBB9 837 aaKnown RBP11.91□□□□□ -0.5
TPM1-221ENST00000559831 MORF4L1Q9UBU8 362 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 FBXO40Q9UH90 709 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 CNPY2Q9Y2B0 182 aa11.91□□□□□ -0.5
TPM1-221ENST00000559831 FIBPO43427 364 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 ALDH1A1P00352 501 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 RPS6P62753 249 aaKnown RBP11.9□□□□□ -0.5
TPM1-221ENST00000559831 UBXN2AP68543 259 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 FAM110CQ1W6H9 321 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 LETM2Q2VYF4 491 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 RILPL1Q5EBL4 403 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 TTC38Q5R3I4 469 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 MCTP2Q6DN12 878 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 SYTL5Q8TDW5 730 aaPredicted RBP11.9□□□□□ -0.5
TPM1-221ENST00000559831 USP28Q96RU2 1077 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 MMP19Q99542 508 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 PORCNQ9H237 461 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 MROH8Q9H579 483 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 A1CFQ9NQ94 594 aaKnown RBP11.9□□□□□ -0.5
TPM1-221ENST00000559831 COL20A1Q9P218 1284 aa11.9□□□□□ -0.5
TPM1-221ENST00000559831 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 PFASO15067 1338 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 ZSWIM8A7E2V4 1837 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 CA12O43570 354 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 TLR2O60603 784 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 BCRP11274 1271 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 HSPA6P17066 643 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 MAP2K2P36507 400 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 TOB1P50616 345 aaPredicted RBP11.89□□□□□ -0.51
TPM1-221ENST00000559831 STK38Q15208 465 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 ZNF174Q15697 407 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 ANO1Q5XXA6 986 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 NEK8Q86SG6 692 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 SAMD3Q8N6K7 520 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 PURBQ96QR8 312 aaKnown RBP11.89□□□□□ -0.51
TPM1-221ENST00000559831 TAAR1Q96RJ0 339 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 GDPD2Q9HCC8 539 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 MAP3K20Q9NYL2 800 aaKnown RBP11.89□□□□□ -0.51
TPM1-221ENST00000559831 CYP39A1Q9NYL5 469 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 CFAP45Q9UL16 551 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 PCDHB6Q9Y5E3 794 aa11.89□□□□□ -0.51
TPM1-221ENST00000559831 CLIC4Q9Y696 253 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms