RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 ASPRV1Q53RT3 343 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 CXCL17Q6UXB2 119 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 FAM126BQ8IXS8 530 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 TMEM199Q8N511 208 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 DNERQ8NFT8 737 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 ANKS1AQ92625 1134 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 ZKSCAN3Q9BRR0 538 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 UBAC1Q9BSL1 405 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 RAD50Q92878 1312 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 LCTP09848 1927 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 B4E1Z4 1266 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 RPS6P62753 249 aaKnown RBP14.35□□□□□ -0.11
SPG11-219ENST00000559822 PDE4DQ08499 809 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 BRDTQ58F21 947 aaPredicted RBP14.35□□□□□ -0.11
SPG11-219ENST00000559822 SLC30A10Q6XR72 485 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 RGS22Q8NE09 1264 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 RUFY2Q8WXA3 655 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 CLEC4DQ8WXI8 215 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 WDR11Q9BZH6 1224 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 PDGFCQ9NRA1 345 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 POLR3EQ9NVU0 708 aa14.35□□□□□ -0.11
SPG11-219ENST00000559822 NKRFO15226 690 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPG11-219ENST00000559822 PARP1P09874 1014 aaKnown RBP14.34□□□□□ -0.11
SPG11-219ENST00000559822 CPT1AP50416 773 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 EPHB4P54760 987 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 ITGA7Q13683 1181 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 CDC37Q16543 378 aaPredicted RBP14.34□□□□□ -0.11
SPG11-219ENST00000559822 PSRC1Q6PGN9 363 aaPredicted RBP14.34□□□□□ -0.11
SPG11-219ENST00000559822 ENAHQ8N8S7 591 aaPredicted RBP14.34□□□□□ -0.11
SPG11-219ENST00000559822 SLC43A3Q8NBI5 491 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 SCFD2Q8WU76 684 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 FAM161BQ96MY7 647 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 GUCD1Q96NT3 240 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 PURBQ96QR8 312 aaKnown RBP14.34□□□□□ -0.11
SPG11-219ENST00000559822 ZSWIM5Q9P217 1185 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
SPG11-219ENST00000559822 TNKSO95271 1327 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 ABCB11O95342 1321 aa14.34□□□□□ -0.11
SPG11-219ENST00000559822 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.33□□□□□ -0.12
SPG11-219ENST00000559822 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.33□□□□□ -0.12
SPG11-219ENST00000559822 RBM47A0AV96 593 aaKnown RBP14.33□□□□□ -0.12
SPG11-219ENST00000559822 DHX16O60231 1041 aaKnown RBP14.33□□□□□ -0.12
SPG11-219ENST00000559822 CD4P01730 458 aa14.33□□□□□ -0.12
SPG11-219ENST00000559822 GOLGA8HP0CJ92 632 aa14.33□□□□□ -0.12
SPG11-219ENST00000559822 TRDNQ13061 729 aa14.33□□□□□ -0.12
SPG11-219ENST00000559822 PPP2R5BQ15173 497 aa14.33□□□□□ -0.12
SPG11-219ENST00000559822 USH1GQ495M9 461 aa14.33□□□□□ -0.12
SPG11-219ENST00000559822 TTC22Q5TAA0 569 aa14.33□□□□□ -0.12
SPG11-219ENST00000559822 MCF2L2Q86YR7 1114 aa14.33□□□□□ -0.12
SPG11-219ENST00000559822 PPP1R12CQ9BZL4 782 aa14.33□□□□□ -0.12
SPG11-219ENST00000559822 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
SPG11-219ENST00000559822 MTIF3Q9H2K0 278 aaKnown RBP14.33□□□□□ -0.12
SPG11-219ENST00000559822 GPHNQ9NQX3 736 aaPredicted RBP14.33□□□□□ -0.12
SPG11-219ENST00000559822 DDX49Q9Y6V7 483 aaKnown RBP14.33□□□□□ -0.12
SPG11-219ENST00000559822 KPNA6O60684 536 aa14.32□□□□□ -0.12
SPG11-219ENST00000559822 EDNRBP24530 442 aa14.32□□□□□ -0.12
SPG11-219ENST00000559822 IFIT1BQ5T764 474 aaKnown RBP14.32□□□□□ -0.12
SPG11-219ENST00000559822 OR6J1Q8NGC5 347 aa14.32□□□□□ -0.12
SPG11-219ENST00000559822 SEMA6BQ9H3T3 888 aa14.32□□□□□ -0.12
SPG11-219ENST00000559822 HIPK3Q9H422 1215 aa14.32□□□□□ -0.12
SPG11-219ENST00000559822 MRPL11Q9Y3B7 192 aaKnown RBP14.32□□□□□ -0.12
SPG11-219ENST00000559822 SUPT20HL2P0C7V6 817 aa14.31□□□□□ -0.12
SPG11-219ENST00000559822 CSF2RAP15509 400 aa14.31□□□□□ -0.12
SPG11-219ENST00000559822 TTLL4Q14679 1199 aa14.31□□□□□ -0.12
SPG11-219ENST00000559822 FBXO11Q86XK2 927 aa14.31□□□□□ -0.12
SPG11-219ENST00000559822 ADGRF4Q8IZF3 695 aa14.31□□□□□ -0.12
SPG11-219ENST00000559822 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.31□□□□□ -0.12
SPG11-219ENST00000559822 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
SPG11-219ENST00000559822 GSPT1P15170 499 aaKnown RBP14.3□□□□□ -0.12
SPG11-219ENST00000559822 PDE4AP27815 886 aa14.3□□□□□ -0.12
SPG11-219ENST00000559822 CYP2C18P33260 490 aa14.3□□□□□ -0.12
SPG11-219ENST00000559822 TRAF1Q13077 416 aa14.3□□□□□ -0.12
SPG11-219ENST00000559822 QRICH1Q2TAL8 776 aa14.3□□□□□ -0.12
SPG11-219ENST00000559822 TMEM240Q5SV17 173 aa14.3□□□□□ -0.12
SPG11-219ENST00000559822 NSUN6Q8TEA1 469 aaKnown RBP14.3□□□□□ -0.12
SPG11-219ENST00000559822 CDX2Q99626 313 aaPredicted RBP14.3□□□□□ -0.12
SPG11-219ENST00000559822 MTG1Q9BT17 334 aaPredicted RBP14.3□□□□□ -0.12
SPG11-219ENST00000559822 CPVLQ9H3G5 476 aa14.3□□□□□ -0.12
SPG11-219ENST00000559822 IL23AQ9NPF7 189 aa14.3□□□□□ -0.12
SPG11-219ENST00000559822 ERICH2A1L162 156 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 DLL1O00548 723 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 B4GALT4O60513 344 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 MYL3P08590 195 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 TXNP10599 105 aaKnown RBP14.29□□□□□ -0.12
SPG11-219ENST00000559822 PTGS1P23219 599 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 DNAJB2P25686 324 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 PSMC6P62333 389 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 PURAQ00577 322 aaKnown RBP14.29□□□□□ -0.12
SPG11-219ENST00000559822 SART3Q15020 963 aaKnown RBP14.29□□□□□ -0.12
SPG11-219ENST00000559822 TMEM63BQ5T3F8 832 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 RALYLQ86SE5 291 aaKnown RBP14.29□□□□□ -0.12
SPG11-219ENST00000559822 RPUSD2Q8IZ73 545 aaKnown RBP14.29□□□□□ -0.12
SPG11-219ENST00000559822 IWS1Q96ST2 819 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 NOC4LQ9BVI4 516 aaKnown RBP14.29□□□□□ -0.12
SPG11-219ENST00000559822 AMNQ9BXJ7 453 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 TRPV6Q9H1D0 765 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 ALDH8A1Q9H2A2 487 aaPredicted RBP14.29□□□□□ -0.12
SPG11-219ENST00000559822 JMJD4Q9H9V9 463 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
SPG11-219ENST00000559822 A6NJR5 290 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms