RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CERS3Q8IU89 383 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 TRMT44Q8IYL2 757 aaKnown RBP7.03□□□□□ -1.28
USP3-215ENST00000559771 CCDC116Q8IYX3 515 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP3-215ENST00000559771 DYNLL2Q96FJ2 89 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 ZBTB40Q9NUA8 1239 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 MAP4K5Q9Y4K4 846 aa7.03□□□□□ -1.28
USP3-215ENST00000559771 ZNFX1Q9P2E3 1918 aaKnown RBP7.03□□□□□ -1.28
USP3-215ENST00000559771 ARID1BQ8NFD5 2236 aaPredicted RBP7.03□□□□□ -1.28
USP3-215ENST00000559771 ZBED9Q6R2W3 1325 aa7.02□□□□□ -1.28
USP3-215ENST00000559771 CYP2D7A0A087X1C5 515 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 GOLIM4O00461 696 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 COBLO75128 1261 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 FDX1P10109 184 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 CYBAP13498 195 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 AKR1B1P15121 316 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 CYP2C19P33261 490 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 GRIN2CQ14957 1233 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 NKAPLQ5M9Q1 402 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 DESI1Q6ICB0 168 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 ERC1Q8IUD2 1116 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 TDHQ8IZJ6 230 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 PRR7Q8TB68 274 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 YTHDC1Q96MU7 727 aaKnown RBP7.02□□□□□ -1.29
USP3-215ENST00000559771 FEZ1Q99689 392 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 MOV10L1Q9BXT6 1211 aaKnown RBP7.02□□□□□ -1.29
USP3-215ENST00000559771 ARMT1Q9H993 441 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 MCM9Q9NXL9 1143 aa7.02□□□□□ -1.29
USP3-215ENST00000559771 DDX20Q9UHI6 824 aaKnown RBP7.02□□□□□ -1.29
USP3-215ENST00000559771 CDH23Q9H251 3354 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 PLXNA1Q9UIW2 1896 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 APBB1O00213 710 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 POLR3DP05423 398 aaPredicted RBP7.01□□□□□ -1.29
USP3-215ENST00000559771 ERCC3P19447 782 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 ADORA2AP29274 412 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 ADD2P35612 726 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 CCNA1P78396 465 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 MDM2Q00987 491 aaPredicted RBP7.01□□□□□ -1.29
USP3-215ENST00000559771 COG2Q14746 738 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 TTF1Q15361 905 aaPredicted RBP7.01□□□□□ -1.29
USP3-215ENST00000559771 C12orf60Q5U649 245 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 RPAP2Q8IXW5 612 aaPredicted RBP7.01□□□□□ -1.29
USP3-215ENST00000559771 TRIM22Q8IYM9 498 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 LPAR1Q92633 364 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 KIF1BPQ96EK5 621 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 DNAJC2Q99543 621 aaKnown RBP7.01□□□□□ -1.29
USP3-215ENST00000559771 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.01□□□□□ -1.29
USP3-215ENST00000559771 CRNKL1Q9BZJ0 848 aaKnown RBP7.01□□□□□ -1.29
USP3-215ENST00000559771 SPATC1LQ9H0A9 340 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 CABP5Q9NP86 173 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 MTMR10Q9NXD2 777 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 ADAMTS5Q9UNA0 930 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 COG6Q9Y2V7 657 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 TMX2Q9Y320 296 aa7.01□□□□□ -1.29
USP3-215ENST00000559771 SPTBN5Q9NRC6 3674 aaKnown RBP7□□□□□ -1.29
USP3-215ENST00000559771 MBD4O95243 580 aa7□□□□□ -1.29
USP3-215ENST00000559771 ATP5JP18859 108 aa7□□□□□ -1.29
USP3-215ENST00000559771 CDK8P49336 464 aa7□□□□□ -1.29
USP3-215ENST00000559771 ATP2B2Q01814 1243 aa7□□□□□ -1.29
USP3-215ENST00000559771 TMEM132BQ14DG7 1078 aa7□□□□□ -1.29
USP3-215ENST00000559771 SNX17Q15036 470 aa7□□□□□ -1.29
USP3-215ENST00000559771 HSP90AB4PQ58FF6 505 aa7□□□□□ -1.29
USP3-215ENST00000559771 PRAMEF19Q5SWL8 479 aa7□□□□□ -1.29
USP3-215ENST00000559771 PPP1R26Q5T8A7 1209 aaPredicted RBP7□□□□□ -1.29
USP3-215ENST00000559771 C20orf194Q5TEA3 1177 aa7□□□□□ -1.29
USP3-215ENST00000559771 WDR78Q5VTH9 848 aa7□□□□□ -1.29
USP3-215ENST00000559771 FOXD4L5Q5VV16 416 aaPredicted RBP7□□□□□ -1.29
USP3-215ENST00000559771 MFSD14CQ5VZR4 134 aa7□□□□□ -1.29
USP3-215ENST00000559771 OLFML2BQ68BL8 750 aa7□□□□□ -1.29
USP3-215ENST00000559771 TMEM179Q6ZVK1 233 aa7□□□□□ -1.29
USP3-215ENST00000559771 CCAR1Q8IX12 1150 aaKnown RBP7□□□□□ -1.29
USP3-215ENST00000559771 SPICE1Q8N0Z3 855 aa7□□□□□ -1.29
USP3-215ENST00000559771 CLASRPQ8N2M8 674 aaKnown RBP7□□□□□ -1.29
USP3-215ENST00000559771 DEFB123Q8N688 67 aa7□□□□□ -1.29
USP3-215ENST00000559771 SHCBP1Q8NEM2 672 aa7□□□□□ -1.29
USP3-215ENST00000559771 REPS2Q8NFH8 660 aa7□□□□□ -1.29
USP3-215ENST00000559771 ATG4CQ96DT6 458 aa7□□□□□ -1.29
USP3-215ENST00000559771 HAUS7Q99871 368 aa7□□□□□ -1.29
USP3-215ENST00000559771 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
USP3-215ENST00000559771 SENP6Q9GZR1 1112 aaPredicted RBP7□□□□□ -1.29
USP3-215ENST00000559771 PUS7LQ9H0K6 701 aaKnown RBP7□□□□□ -1.29
USP3-215ENST00000559771 BOLA2Q9H3K6 86 aa7□□□□□ -1.29
USP3-215ENST00000559771 VCPKMTQ9H867 229 aa7□□□□□ -1.29
USP3-215ENST00000559771 FBXO28Q9NVF7 368 aa7□□□□□ -1.29
USP3-215ENST00000559771 PAG1Q9NWQ8 432 aa7□□□□□ -1.29
USP3-215ENST00000559771 HOXC10Q9NYD6 342 aa7□□□□□ -1.29
USP3-215ENST00000559771 SMCHD1A6NHR9 2005 aa7□□□□□ -1.29
USP3-215ENST00000559771 USP17L12C9JPN9 530 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 USP17L21D6R901 530 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 DNM1LO00429 736 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 MPHOSPH10O00566 681 aaKnown RBP6.99□□□□□ -1.29
USP3-215ENST00000559771 STRNO43815 780 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 GLRX3O76003 335 aaKnown RBP6.99□□□□□ -1.29
USP3-215ENST00000559771 F12P00748 615 aaPredicted RBP6.99□□□□□ -1.29
USP3-215ENST00000559771 IFIT2P09913 472 aaKnown RBP6.99□□□□□ -1.29
USP3-215ENST00000559771 EEF2P13639 858 aaKnown RBP6.99□□□□□ -1.29
USP3-215ENST00000559771 CNGA1P29973 690 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 UBE3CQ15386 1083 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 GJC2Q5T442 439 aaPredicted RBP6.99□□□□□ -1.29
USP3-215ENST00000559771 ANO1Q5XXA6 986 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms