RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 MTMR10Q9NXD2 777 aa22.35■■□□□ 1.17
KNSTRN-208ENST00000559604 TBX21Q9UL17 535 aa22.35■■□□□ 1.17
KNSTRN-208ENST00000559604 MROH7Q68CQ1 1323 aa22.34■■□□□ 1.17
KNSTRN-208ENST00000559604 ARVCFO00192 962 aa22.34■■□□□ 1.17
KNSTRN-208ENST00000559604 DYNC1LI2O43237 492 aaPredicted RBP22.34■■□□□ 1.17
KNSTRN-208ENST00000559604 CHMLP26374 656 aa22.34■■□□□ 1.17
KNSTRN-208ENST00000559604 FSCN1Q16658 493 aaKnown RBP22.34■■□□□ 1.17
KNSTRN-208ENST00000559604 CXCL17Q6UXB2 119 aa22.34■■□□□ 1.17
KNSTRN-208ENST00000559604 KIAA1211Q6ZU35 1233 aa22.34■■□□□ 1.17
KNSTRN-208ENST00000559604 AP5M1Q9H0R1 490 aa22.34■■□□□ 1.17
KNSTRN-208ENST00000559604 Q9Y3F1 56 aa22.34■■□□□ 1.17
KNSTRN-208ENST00000559604 CDC37Q16543 378 aaPredicted RBP22.33■■□□□ 1.17
KNSTRN-208ENST00000559604 USH1GQ495M9 461 aa22.33■■□□□ 1.17
KNSTRN-208ENST00000559604 ASPRV1Q53RT3 343 aa22.33■■□□□ 1.17
KNSTRN-208ENST00000559604 ADGRF4Q8IZF3 695 aa22.33■■□□□ 1.17
KNSTRN-208ENST00000559604 RBM47A0AV96 593 aaKnown RBP22.32■■□□□ 1.16
KNSTRN-208ENST00000559604 PTH1RQ03431 593 aa22.32■■□□□ 1.16
KNSTRN-208ENST00000559604 FPGSQ05932 587 aa22.32■■□□□ 1.16
KNSTRN-208ENST00000559604 SEC23AQ15436 765 aa22.32■■□□□ 1.16
KNSTRN-208ENST00000559604 DUSP28Q4G0W2 176 aa22.32■■□□□ 1.16
KNSTRN-208ENST00000559604 CYB5R4Q7L1T6 521 aa22.32■■□□□ 1.16
KNSTRN-208ENST00000559604 FAM126BQ8IXS8 530 aa22.32■■□□□ 1.16
KNSTRN-208ENST00000559604 SLC43A3Q8NBI5 491 aa22.32■■□□□ 1.16
KNSTRN-208ENST00000559604 UBAC1Q9BSL1 405 aa22.32■■□□□ 1.16
KNSTRN-208ENST00000559604 CABYRO75952 493 aa22.31■■□□□ 1.16
KNSTRN-208ENST00000559604 TIMP1P01033 207 aa22.31■■□□□ 1.16
KNSTRN-208ENST00000559604 PARP1P09874 1014 aaKnown RBP22.31■■□□□ 1.16
KNSTRN-208ENST00000559604 EDNRBP24530 442 aa22.31■■□□□ 1.16
KNSTRN-208ENST00000559604 FAM109BQ6ICB4 259 aaPredicted RBP22.31■■□□□ 1.16
KNSTRN-208ENST00000559604 RGS22Q8NE09 1264 aa22.31■■□□□ 1.16
KNSTRN-208ENST00000559604 RUFY2Q8WXA3 655 aa22.31■■□□□ 1.16
KNSTRN-208ENST00000559604 WDR11Q9BZH6 1224 aa22.31■■□□□ 1.16
KNSTRN-208ENST00000559604 GRIN2DO15399 1336 aa22.31■■□□□ 1.16
KNSTRN-208ENST00000559604 CYP21A2P08686 494 aa22.3■■□□□ 1.16
KNSTRN-208ENST00000559604 IFIT1BQ5T764 474 aaKnown RBP22.3■■□□□ 1.16
KNSTRN-208ENST00000559604 DNERQ8NFT8 737 aa22.3■■□□□ 1.16
KNSTRN-208ENST00000559604 TBC1D5Q92609 795 aa22.3■■□□□ 1.16
KNSTRN-208ENST00000559604 JMJD4Q9H9V9 463 aa22.3■■□□□ 1.16
KNSTRN-208ENST00000559604 ZEB2O60315 1214 aa22.29■■□□□ 1.16
KNSTRN-208ENST00000559604 CD4P01730 458 aa22.29■■□□□ 1.16
KNSTRN-208ENST00000559604 PDE4DQ08499 809 aa22.29■■□□□ 1.16
KNSTRN-208ENST00000559604 QRICH1Q2TAL8 776 aa22.29■■□□□ 1.16
KNSTRN-208ENST00000559604 MFSD5Q6N075 450 aa22.29■■□□□ 1.16
KNSTRN-208ENST00000559604 STAG2Q8N3U4 1231 aa22.29■■□□□ 1.16
KNSTRN-208ENST00000559604 TAF6LQ9Y6J9 622 aa22.29■■□□□ 1.16
KNSTRN-208ENST00000559604 ABCB11O95342 1321 aa22.29■■□□□ 1.16
KNSTRN-208ENST00000559604 TLR3O15455 904 aaKnown RBP22.28■■□□□ 1.16
KNSTRN-208ENST00000559604 SGSM2O43147 1006 aa22.28■■□□□ 1.16
KNSTRN-208ENST00000559604 ITGA7Q13683 1181 aa22.28■■□□□ 1.16
KNSTRN-208ENST00000559604 VAT1LQ9HCJ6 419 aa22.28■■□□□ 1.16
KNSTRN-208ENST00000559604 STXBP5LQ9Y2K9 1186 aa22.28■■□□□ 1.16
KNSTRN-208ENST00000559604 U3KPZ7 1027 aaPredicted RBP22.28■■□□□ 1.16
KNSTRN-208ENST00000559604 DHX16O60231 1041 aaKnown RBP22.27■■□□□ 1.16
KNSTRN-208ENST00000559604 PSMC6P62333 389 aa22.27■■□□□ 1.16
KNSTRN-208ENST00000559604 SYTL5Q8TDW5 730 aaPredicted RBP22.27■■□□□ 1.16
KNSTRN-208ENST00000559604 RNPC3Q96LT9 517 aaKnown RBP22.27■■□□□ 1.16
KNSTRN-208ENST00000559604 GUCD1Q96NT3 240 aa22.27■■□□□ 1.16
KNSTRN-208ENST00000559604 MPHOSPH6Q99547 160 aaKnown RBP22.27■■□□□ 1.16
KNSTRN-208ENST00000559604 MAF1Q9H063 256 aa22.27■■□□□ 1.16
KNSTRN-208ENST00000559604 COL20A1Q9P218 1284 aa22.27■■□□□ 1.16
KNSTRN-208ENST00000559604 SMAD3P84022 425 aaKnown RBP22.26■■□□□ 1.15
KNSTRN-208ENST00000559604 TRDNQ13061 729 aa22.26■■□□□ 1.15
KNSTRN-208ENST00000559604 FBXO11Q86XK2 927 aa22.26■■□□□ 1.15
KNSTRN-208ENST00000559604 FAM161BQ96MY7 647 aa22.26■■□□□ 1.15
KNSTRN-208ENST00000559604 PPP1R12CQ9BZL4 782 aa22.26■■□□□ 1.15
KNSTRN-208ENST00000559604 MAD2L2Q9UI95 211 aa22.26■■□□□ 1.15
KNSTRN-208ENST00000559604 KLRF2D3W0D1 207 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 ZNF697Q5TEC3 545 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 STOX1Q6ZVD7 989 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 C16orf59Q7L2K0 433 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 OR6J1Q8NGC5 347 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 SCFD2Q8WU76 684 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 TAAR1Q96RJ0 339 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 SEZ6LQ9BYH1 1024 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 SENP2Q9HC62 589 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 KIAA1217Q5T5P2 1943 aa22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 BAZ2BQ9UIF8 2168 aaKnown RBP22.25■■□□□ 1.15
KNSTRN-208ENST00000559604 PALM3A6NDB9 673 aaPredicted RBP22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 B4DLN1 442 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 E7EWF7 191 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 NKRFO15226 690 aaKnown RBP eCLIP22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 CSF2RAP15509 400 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 CPT1AP50416 773 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 MRPL12P52815 198 aaKnown RBP22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 PURAQ00577 322 aaKnown RBP22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 PPIGQ13427 754 aaKnown RBP eCLIP22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 PPP2R5BQ15173 497 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 MCF2L2Q86YR7 1114 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 COPS5Q92905 334 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 MTMR8Q96EF0 704 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 TRPV6Q9H1D0 765 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 POLR3EQ9NVU0 708 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 MRPL11Q9Y3B7 192 aaKnown RBP22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 SCN10AQ9Y5Y9 1956 aa22.24■■□□□ 1.15
KNSTRN-208ENST00000559604 IFIT3O14879 490 aaKnown RBP22.23■■□□□ 1.15
KNSTRN-208ENST00000559604 B4GALT4O60513 344 aa22.23■■□□□ 1.15
KNSTRN-208ENST00000559604 PPP1R11O60927 126 aaPredicted RBP22.23■■□□□ 1.15
KNSTRN-208ENST00000559604 ARIH2O95376 493 aa22.23■■□□□ 1.15
KNSTRN-208ENST00000559604 CYP2C18P33260 490 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms