RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 SYNE3Q6ZMZ3 975 aa21.69■■□□□ 1.06
CASC4-209ENST00000559222 ZNF467Q7Z7K2 595 aaPredicted RBP21.69■■□□□ 1.06
CASC4-209ENST00000559222 FBXL16Q8N461 479 aa21.69■■□□□ 1.06
CASC4-209ENST00000559222 KATNBL1Q9H079 304 aa21.69■■□□□ 1.06
CASC4-209ENST00000559222 SYNGAP1Q96PV0 1343 aa21.69■■□□□ 1.06
CASC4-209ENST00000559222 NID2Q14112 1375 aa21.69■■□□□ 1.06
CASC4-209ENST00000559222 ALPK3Q96L96 1907 aa21.68■■□□□ 1.06
CASC4-209ENST00000559222 ADCY6O43306 1168 aa21.68■■□□□ 1.06
CASC4-209ENST00000559222 PTGS1P23219 599 aa21.68■■□□□ 1.06
CASC4-209ENST00000559222 ADD1P35611 737 aaKnown RBP21.68■■□□□ 1.06
CASC4-209ENST00000559222 MNX1P50219 401 aaPredicted RBP21.68■■□□□ 1.06
CASC4-209ENST00000559222 DIS3LQ8TF46 1054 aaKnown RBP21.68■■□□□ 1.06
CASC4-209ENST00000559222 IL17RAQ96F46 866 aa21.68■■□□□ 1.06
CASC4-209ENST00000559222 NCOA5Q9HCD5 579 aaKnown RBP21.68■■□□□ 1.06
CASC4-209ENST00000559222 DDX20Q9UHI6 824 aaKnown RBP21.68■■□□□ 1.06
CASC4-209ENST00000559222 PNMA2Q9UL42 364 aa21.68■■□□□ 1.06
CASC4-209ENST00000559222 MRPL11Q9Y3B7 192 aaKnown RBP21.68■■□□□ 1.06
CASC4-209ENST00000559222 PPFIA3O75145 1194 aa21.67■■□□□ 1.06
CASC4-209ENST00000559222 TFRCP02786 760 aaKnown RBP21.67■■□□□ 1.06
CASC4-209ENST00000559222 GNAQP50148 359 aa21.67■■□□□ 1.06
CASC4-209ENST00000559222 METAP2P50579 478 aaKnown RBP eCLIP21.67■■□□□ 1.06
CASC4-209ENST00000559222 ALDH5A1P51649 535 aaPredicted RBP21.67■■□□□ 1.06
CASC4-209ENST00000559222 ANAPC15P60006 121 aa21.67■■□□□ 1.06
CASC4-209ENST00000559222 SYTL5Q8TDW5 730 aaPredicted RBP21.67■■□□□ 1.06
CASC4-209ENST00000559222 RRP36Q96EU6 259 aaKnown RBP21.67■■□□□ 1.06
CASC4-209ENST00000559222 LZTS2Q9BRK4 669 aa21.67■■□□□ 1.06
CASC4-209ENST00000559222 PDRG1Q9NUG6 133 aa21.67■■□□□ 1.06
CASC4-209ENST00000559222 ZHX1Q9UKY1 873 aaPredicted RBP21.67■■□□□ 1.06
CASC4-209ENST00000559222 CFBP00751 764 aa21.66■■□□□ 1.06
CASC4-209ENST00000559222 SMARCA1P28370 1054 aa21.66■■□□□ 1.06
CASC4-209ENST00000559222 PDIA3P30101 505 aaKnown RBP21.66■■□□□ 1.06
CASC4-209ENST00000559222 HOXA13P31271 388 aaPredicted RBP21.66■■□□□ 1.06
CASC4-209ENST00000559222 UBE2Q1Q7Z7E8 422 aa21.66■■□□□ 1.06
CASC4-209ENST00000559222 GPKOWQ92917 476 aaPredicted RBP eCLIP21.66■■□□□ 1.06
CASC4-209ENST00000559222 TAAR1Q96RJ0 339 aa21.66■■□□□ 1.06
CASC4-209ENST00000559222 RBM28Q9NW13 759 aaKnown RBP21.66■■□□□ 1.06
CASC4-209ENST00000559222 OGDHLQ9ULD0 1010 aa21.66■■□□□ 1.06
CASC4-209ENST00000559222 MKI67P46013 3256 aaKnown RBP21.66■■□□□ 1.06
CASC4-209ENST00000559222 SEPT4O43236 478 aa21.65■■□□□ 1.06
CASC4-209ENST00000559222 DTNBO60941 627 aa21.65■■□□□ 1.06
CASC4-209ENST00000559222 EVCP57679 992 aa21.65■■□□□ 1.06
CASC4-209ENST00000559222 CCT2P78371 535 aaKnown RBP21.65■■□□□ 1.06
CASC4-209ENST00000559222 IRX5P78411 483 aaPredicted RBP21.65■■□□□ 1.06
CASC4-209ENST00000559222 TMEM63BQ5T3F8 832 aa21.65■■□□□ 1.06
CASC4-209ENST00000559222 EEPD1Q7L9B9 569 aa21.65■■□□□ 1.06
CASC4-209ENST00000559222 FBXO16Q8IX29 292 aaPredicted RBP21.65■■□□□ 1.06
CASC4-209ENST00000559222 MSL3Q8N5Y2 521 aaKnown RBP21.65■■□□□ 1.06
CASC4-209ENST00000559222 RGS22Q8NE09 1264 aa21.65■■□□□ 1.06
CASC4-209ENST00000559222 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.64■■□□□ 1.05
CASC4-209ENST00000559222 HSD17B4P51659 736 aa21.64■■□□□ 1.05
CASC4-209ENST00000559222 RCAN1P53805 252 aa21.64■■□□□ 1.05
CASC4-209ENST00000559222 ACVR2BQ13705 512 aa21.64■■□□□ 1.05
CASC4-209ENST00000559222 TYW1BQ6NUM6 668 aa21.64■■□□□ 1.05
CASC4-209ENST00000559222 PDGFCQ9NRA1 345 aa21.64■■□□□ 1.05
CASC4-209ENST00000559222 CNPY2Q9Y2B0 182 aa21.64■■□□□ 1.05
CASC4-209ENST00000559222 KIAA1217Q5T5P2 1943 aa21.63■■□□□ 1.05
CASC4-209ENST00000559222 FARP2O94887 1054 aaPredicted RBP21.63■■□□□ 1.05
CASC4-209ENST00000559222 AK2P54819 239 aa21.63■■□□□ 1.05
CASC4-209ENST00000559222 GHRHRQ02643 423 aa21.63■■□□□ 1.05
CASC4-209ENST00000559222 STK3Q13188 491 aa21.63■■□□□ 1.05
CASC4-209ENST00000559222 WWC2Q6AWC2 1192 aa21.63■■□□□ 1.05
CASC4-209ENST00000559222 NOL8Q76FK4 1167 aaKnown RBP21.63■■□□□ 1.05
CASC4-209ENST00000559222 MORC4Q8TE76 937 aa21.63■■□□□ 1.05
CASC4-209ENST00000559222 KIF2CQ99661 725 aa21.63■■□□□ 1.05
CASC4-209ENST00000559222 SEC63Q9UGP8 760 aaKnown RBP21.63■■□□□ 1.05
CASC4-209ENST00000559222 ASB14A6NK59 587 aa21.62■■□□□ 1.05
CASC4-209ENST00000559222 EDNRBP24530 442 aa21.62■■□□□ 1.05
CASC4-209ENST00000559222 NTRK3Q16288 839 aa21.62■■□□□ 1.05
CASC4-209ENST00000559222 MCF2L2Q86YR7 1114 aa21.62■■□□□ 1.05
CASC4-209ENST00000559222 PHKBQ93100 1093 aa21.62■■□□□ 1.05
CASC4-209ENST00000559222 NRBP1Q9UHY1 535 aa21.62■■□□□ 1.05
CASC4-209ENST00000559222 V9GY48 417 aaPredicted RBP21.62■■□□□ 1.05
CASC4-209ENST00000559222 PDE4DIPQ5VU43 2346 aa21.62■■□□□ 1.05
CASC4-209ENST00000559222 LARGE1O95461 756 aa21.61■■□□□ 1.05
CASC4-209ENST00000559222 EIF2AK2P19525 551 aaKnown RBP21.61■■□□□ 1.05
CASC4-209ENST00000559222 ADCYAP1R1P41586 468 aa21.61■■□□□ 1.05
CASC4-209ENST00000559222 CCDC144BQ3MJ40 725 aa21.61■■□□□ 1.05
CASC4-209ENST00000559222 GJC2Q5T442 439 aaPredicted RBP21.61■■□□□ 1.05
CASC4-209ENST00000559222 TAPT1Q6NXT6 567 aa21.61■■□□□ 1.05
CASC4-209ENST00000559222 HEATR3Q7Z4Q2 680 aa21.61■■□□□ 1.05
CASC4-209ENST00000559222 IL31RAQ8NI17 732 aa21.61■■□□□ 1.05
CASC4-209ENST00000559222 PAWRQ96IZ0 340 aaKnown RBP21.61■■□□□ 1.05
CASC4-209ENST00000559222 ABHD16BQ9H3Z7 469 aa21.61■■□□□ 1.05
CASC4-209ENST00000559222 TPCN1Q9ULQ1 816 aa21.61■■□□□ 1.05
CASC4-209ENST00000559222 AKR1A1P14550 325 aa21.6■■□□□ 1.05
CASC4-209ENST00000559222 USP17L6PQ6QN14 398 aa21.6■■□□□ 1.05
CASC4-209ENST00000559222 ZFP91Q96JP5 570 aaPredicted RBP21.6■■□□□ 1.05
CASC4-209ENST00000559222 ADD3Q9UEY8 706 aaKnown RBP21.6■■□□□ 1.05
CASC4-209ENST00000559222 MYADML2A6NDP7 307 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 STXBP3O00186 592 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 ADAMTS3O15072 1205 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 PGK1P00558 417 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 PKN1Q16512 942 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 UBE2SQ16763 222 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 FCHSD1Q86WN1 690 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 DNERQ8NFT8 737 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 RMDN3Q96TC7 470 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 C22orf23Q9BZE7 217 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 PXMP2Q9NR77 195 aa21.59■■□□□ 1.05
CASC4-209ENST00000559222 SYNRGQ9UMZ2 1314 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms