RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 SPDYE3A6NKU9 549 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 STRNO43815 780 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 MMP1P03956 469 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 PDIA4P13667 645 aaKnown RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 PTPREP23469 700 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 ADORA2AP29274 412 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 HOXA13P31271 388 aaPredicted RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 PSMC4P43686 418 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 RPS6P62753 249 aaKnown RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 AP3B2Q13367 1082 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 BAATQ14032 418 aaPredicted RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 UBE2SQ16763 222 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 NOM1Q5C9Z4 860 aaKnown RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 MCTP2Q6DN12 878 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 MCTP1Q6DN14 999 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 USP17L6PQ6QN14 398 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 SLC30A10Q6XR72 485 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 FCHSD1Q86WN1 690 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 DIS3L2Q8IYB7 885 aaKnown RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 BLIDQ8IZY5 108 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 ABRAQ8N0Z2 381 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 SAMD3Q8N6K7 520 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 DAGLBQ8NCG7 672 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 RGS22Q8NE09 1264 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 FBXO18Q8NFZ0 1043 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 CD99L2Q8TCZ2 262 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 ZNF296Q8WUU4 475 aaPredicted RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 SOCS4Q8WXH5 440 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 IPO9Q96P70 1041 aaKnown RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 EHMT1Q9H9B1 1298 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 GJB4Q9NTQ9 266 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 SLC5A4Q9NY91 659 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 MAP3K20Q9NYL2 800 aaKnown RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 CYP39A1Q9NYL5 469 aa7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 BIN2Q9UBW5 565 aaPredicted RBP7.56□□□□□ -1.2
CHRNA3-204ENST00000559002 COL11A1P12107 1806 aaPredicted RBP7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 CCDC194A0A1B0GVG4 234 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 SLC15A5A6NIM6 579 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 PIK3CDO00329 1044 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 MEIS2O14770 477 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 OPLAHO14841 1288 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 STX6O43752 255 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 FOSP01100 380 aaPredicted RBP7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 PGK2P07205 417 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 HSPA1AP0DMV8 641 aaKnown RBP7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 HSPA1BP0DMV9 641 aaKnown RBP7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 SYT1P21579 422 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 HOXD10P28358 340 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 RGS2P41220 211 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 HSD17B4P51659 736 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 GHRHRQ02643 423 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 GRB14Q14449 540 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 JAKMIP3Q5VZ66 844 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 KRT25Q7Z3Z0 450 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 DPP9Q86TI2 863 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 RASGRP4Q8TDF6 673 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 SYTL5Q8TDW5 730 aaPredicted RBP7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 TBC1D5Q92609 795 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 SHISA4Q96DD7 197 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 TRIM47Q96LD4 638 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 MPHOSPH6Q99547 160 aaKnown RBP7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 NUDT12Q9BQG2 462 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 ARHGAP39Q9C0H5 1083 aa7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 ADD3Q9UEY8 706 aaKnown RBP7.55□□□□□ -1.2
CHRNA3-204ENST00000559002 BTBD18B2RXH4 712 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 B4DLN1 442 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 ADAMTS3O15072 1205 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 FOXN1O15353 648 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 GNRH1P01148 92 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 CTCFP49711 727 aaPredicted RBP7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 CNTN2Q02246 1040 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 MAP2K5Q13163 448 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 NR5A1Q13285 461 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 NONOQ15233 471 aaKnown RBP eCLIP7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 MORN1Q5T089 497 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 ARHGEF16Q5VV41 709 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 DNERQ8NFT8 737 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 OXER1Q8TDS5 423 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 PGBD1Q96JS3 809 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 RMDN3Q96TC7 470 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 ANO3Q9BYT9 981 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 FOXP1Q9H334 677 aaPredicted RBP7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 TMEM260Q9NX78 707 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 PCDHA6Q9UN73 950 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 PCDHA8Q9Y5H6 950 aa7.54□□□□□ -1.2
CHRNA3-204ENST00000559002 MYH6P13533 1939 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 ASB14A6NK59 587 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 COBLO75128 1261 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 ZSCAN22P10073 491 aaPredicted RBP7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 HSPA8P11142 646 aaKnown RBP7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 EIF2AK2P19525 551 aaKnown RBP7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 CYP2B6P20813 491 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 CTGFP29279 349 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 CCND2P30279 289 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 CLK2P49760 499 aaKnown RBP7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 PRMT2P55345 433 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 UBXN2AP68543 259 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 NUCB2P80303 420 aa7.53□□□□□ -1.2
CHRNA3-204ENST00000559002 PRKCZQ05513 592 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms