RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 VTI1AQ96AJ9 217 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 AP5M1Q9H0R1 490 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 TMEM39AQ9NV64 488 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 DNAH12Q6ZR08 3092 aa17.65■□□□□ 0.42
SMAD6-203ENST00000558937 ARVCFO00192 962 aa17.65■□□□□ 0.42
SMAD6-203ENST00000558937 SGSM2O43147 1006 aa17.65■□□□□ 0.42
SMAD6-203ENST00000558937 DYNC1LI2O43237 492 aaPredicted RBP17.65■□□□□ 0.42
SMAD6-203ENST00000558937 RAG1P15918 1043 aa17.65■□□□□ 0.42
SMAD6-203ENST00000558937 CDK7P50613 346 aa17.65■□□□□ 0.42
SMAD6-203ENST00000558937 FSCN1Q16658 493 aaKnown RBP17.65■□□□□ 0.42
SMAD6-203ENST00000558937 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
SMAD6-203ENST00000558937 Q7L0L9 218 aa17.65■□□□□ 0.42
SMAD6-203ENST00000558937 ADGRF4Q8IZF3 695 aa17.65■□□□□ 0.42
SMAD6-203ENST00000558937 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
SMAD6-203ENST00000558937 MROH7Q68CQ1 1323 aa17.65■□□□□ 0.42
SMAD6-203ENST00000558937 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
SMAD6-203ENST00000558937 TRDNQ13061 729 aa17.64■□□□□ 0.41
SMAD6-203ENST00000558937 QRICH1Q2TAL8 776 aa17.64■□□□□ 0.41
SMAD6-203ENST00000558937 CXCL17Q6UXB2 119 aa17.64■□□□□ 0.41
SMAD6-203ENST00000558937 DEFB123Q8N688 67 aa17.64■□□□□ 0.41
SMAD6-203ENST00000558937 TBX21Q9UL17 535 aa17.64■□□□□ 0.41
SMAD6-203ENST00000558937 Q9Y3F1 56 aa17.64■□□□□ 0.41
SMAD6-203ENST00000558937 TAF6LQ9Y6J9 622 aa17.64■□□□□ 0.41
SMAD6-203ENST00000558937 ABCB11O95342 1321 aa17.64■□□□□ 0.41
SMAD6-203ENST00000558937 EDNRBP24530 442 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 EPHB4P54760 987 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 PDE4DQ08499 809 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 DUSP28Q4G0W2 176 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 FAM126BQ8IXS8 530 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 STAG2Q8N3U4 1231 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 RGS22Q8NE09 1264 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 DNERQ8NFT8 737 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 JMJD4Q9H9V9 463 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 SZT2Q5T011 3432 aa17.63■□□□□ 0.41
SMAD6-203ENST00000558937 RBM47A0AV96 593 aaKnown RBP17.62■□□□□ 0.41
SMAD6-203ENST00000558937 ZEB2O60315 1214 aa17.62■□□□□ 0.41
SMAD6-203ENST00000558937 CABYRO75952 493 aa17.62■□□□□ 0.41
SMAD6-203ENST00000558937 FPGSQ05932 587 aa17.62■□□□□ 0.41
SMAD6-203ENST00000558937 STOX1Q6ZVD7 989 aa17.62■□□□□ 0.41
SMAD6-203ENST00000558937 FBXO11Q86XK2 927 aa17.62■□□□□ 0.41
SMAD6-203ENST00000558937 TBC1D5Q92609 795 aa17.62■□□□□ 0.41
SMAD6-203ENST00000558937 MPHOSPH6Q99547 160 aaKnown RBP17.62■□□□□ 0.41
SMAD6-203ENST00000558937 WDR11Q9BZH6 1224 aa17.62■□□□□ 0.41
SMAD6-203ENST00000558937 VAT1LQ9HCJ6 419 aa17.62■□□□□ 0.41
SMAD6-203ENST00000558937 LAMA3Q16787 3333 aa17.62■□□□□ 0.41
SMAD6-203ENST00000558937 E7EWF7 191 aa17.61■□□□□ 0.41
SMAD6-203ENST00000558937 TLR3O15455 904 aaKnown RBP17.61■□□□□ 0.41
SMAD6-203ENST00000558937 RALYLQ86SE5 291 aaKnown RBP17.61■□□□□ 0.41
SMAD6-203ENST00000558937 SLC43A3Q8NBI5 491 aa17.61■□□□□ 0.41
SMAD6-203ENST00000558937 SYTL5Q8TDW5 730 aaPredicted RBP17.61■□□□□ 0.41
SMAD6-203ENST00000558937 MTMR10Q9NXD2 777 aa17.61■□□□□ 0.41
SMAD6-203ENST00000558937 COL20A1Q9P218 1284 aa17.61■□□□□ 0.41
SMAD6-203ENST00000558937 KLRF2D3W0D1 207 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 IFIT3O14879 490 aaKnown RBP17.6■□□□□ 0.41
SMAD6-203ENST00000558937 TIMP1P01033 207 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 ITGA7Q13683 1181 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 PPP2R5BQ15173 497 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 NCOA7Q8NI08 942 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 MAP4K1Q92918 833 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 MAF1Q9H063 256 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 SENP2Q9HC62 589 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 MAD2L2Q9UI95 211 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 MRPL11Q9Y3B7 192 aaKnown RBP17.6■□□□□ 0.41
SMAD6-203ENST00000558937 RBM8AQ9Y5S9 174 aaKnown RBP17.6■□□□□ 0.41
SMAD6-203ENST00000558937 GRIN2DO15399 1336 aa17.6■□□□□ 0.41
SMAD6-203ENST00000558937 PALM3A6NDB9 673 aaPredicted RBP17.59■□□□□ 0.41
SMAD6-203ENST00000558937 B4DLN1 442 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 CD4P01730 458 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 MRPL12P52815 198 aaKnown RBP17.59■□□□□ 0.41
SMAD6-203ENST00000558937 PSMC6P62333 389 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 GRM4Q14833 912 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 MFSD5Q6N075 450 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 MCF2L2Q86YR7 1114 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 OR6J1Q8NGC5 347 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 SCFD2Q8WU76 684 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 MTMR8Q96EF0 704 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 RNPC3Q96LT9 517 aaKnown RBP17.59■□□□□ 0.41
SMAD6-203ENST00000558937 TAAR1Q96RJ0 339 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 PPP1R12CQ9BZL4 782 aa17.59■□□□□ 0.41
SMAD6-203ENST00000558937 ERICH2A1L162 156 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 NKRFO15226 690 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMAD6-203ENST00000558937 PPP1R11O60927 126 aaPredicted RBP17.58■□□□□ 0.4
SMAD6-203ENST00000558937 ANTXR2P58335 489 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 WTAPQ15007 396 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 SLC35G1Q2M3R5 365 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 FAM109BQ6ICB4 259 aaPredicted RBP17.58■□□□□ 0.4
SMAD6-203ENST00000558937 CHST3Q7LGC8 479 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 MB21D2Q8IYB1 491 aaPredicted RBP17.58■□□□□ 0.4
SMAD6-203ENST00000558937 COPS5Q92905 334 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 AMNQ9BXJ7 453 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 POLR3EQ9NVU0 708 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 SCN10AQ9Y5Y9 1956 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 KIAA1217Q5T5P2 1943 aa17.58■□□□□ 0.4
SMAD6-203ENST00000558937 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
SMAD6-203ENST00000558937 OPLAHO14841 1288 aa17.57■□□□□ 0.4
SMAD6-203ENST00000558937 ZBTB5O15062 677 aa17.57■□□□□ 0.4
SMAD6-203ENST00000558937 ARIH2O95376 493 aa17.57■□□□□ 0.4
SMAD6-203ENST00000558937 MYL3P08590 195 aa17.57■□□□□ 0.4
SMAD6-203ENST00000558937 CPT1AP50416 773 aa17.57■□□□□ 0.4
SMAD6-203ENST00000558937 PPIGQ13427 754 aaKnown RBP eCLIP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms