RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 TCHHQ07283 1943 aa12.81□□□□□ -0.36
HMG20A-206ENST00000558845 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
HMG20A-206ENST00000558845 CCDC194A0A1B0GVG4 234 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 VWA5AO00534 786 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 FIBPO43427 364 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 ZBED4O75132 1171 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 PPP6R2O75170 966 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 FOSP01100 380 aaPredicted RBP12.8□□□□□ -0.36
HMG20A-206ENST00000558845 GJA5P36382 358 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 TOB1P50616 345 aaPredicted RBP12.8□□□□□ -0.36
HMG20A-206ENST00000558845 UBE2HP62256 183 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 FMR1Q06787 632 aaKnown RBP eCLIP12.8□□□□□ -0.36
HMG20A-206ENST00000558845 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.36
HMG20A-206ENST00000558845 DGKZQ13574 1117 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 SLC39A14Q15043 492 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 PTPAQ15257 358 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 EARS2Q5JPH6 523 aaKnown RBP12.8□□□□□ -0.36
HMG20A-206ENST00000558845 SMC1BQ8NDV3 1235 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 CHAMP1Q96JM3 812 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 CEP131Q9UPN4 1083 aa12.8□□□□□ -0.36
HMG20A-206ENST00000558845 SPDYE16A6NNV3 312 aaPredicted RBP12.79□□□□□ -0.36
HMG20A-206ENST00000558845 MEIS2O14770 477 aa12.79□□□□□ -0.36
HMG20A-206ENST00000558845 OPLAHO14841 1288 aa12.79□□□□□ -0.36
HMG20A-206ENST00000558845 MBD3O95983 291 aa12.79□□□□□ -0.36
HMG20A-206ENST00000558845 NCLP19338 710 aaKnown RBP12.79□□□□□ -0.36
HMG20A-206ENST00000558845 GTF2A2P52657 109 aa12.79□□□□□ -0.36
HMG20A-206ENST00000558845 NONOQ15233 471 aaKnown RBP eCLIP12.79□□□□□ -0.36
HMG20A-206ENST00000558845 TKFCQ3LXA3 575 aa12.79□□□□□ -0.36
HMG20A-206ENST00000558845 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
HMG20A-206ENST00000558845 ATG4CQ96DT6 458 aa12.79□□□□□ -0.36
HMG20A-206ENST00000558845 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
HMG20A-206ENST00000558845 ZNF408Q9H9D4 720 aa12.79□□□□□ -0.36
HMG20A-206ENST00000558845 TFIP11Q9UBB9 837 aaKnown RBP12.79□□□□□ -0.36
HMG20A-206ENST00000558845 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 PRPF40AO75400 957 aaKnown RBP12.78□□□□□ -0.36
HMG20A-206ENST00000558845 CETPP11597 493 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
HMG20A-206ENST00000558845 KLHL40Q2TBA0 621 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 FOXD4L6Q3SYB3 417 aaPredicted RBP12.78□□□□□ -0.36
HMG20A-206ENST00000558845 TREML2Q5T2D2 321 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 FOXD4L3Q6VB84 417 aaPredicted RBP12.78□□□□□ -0.36
HMG20A-206ENST00000558845 PIK3AP1Q6ZUJ8 805 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 JMYQ8N9B5 988 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 HHIPL1Q96JK4 782 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 NAP1L4Q99733 375 aaKnown RBP12.78□□□□□ -0.36
HMG20A-206ENST00000558845 GDPD2Q9HCC8 539 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 ZNF214Q9UL59 606 aaPredicted RBP12.78□□□□□ -0.36
HMG20A-206ENST00000558845 CCPG1Q9ULG6 757 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 CLIC4Q9Y696 253 aa12.78□□□□□ -0.36
HMG20A-206ENST00000558845 A0A1W2PQ27 194 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 A0A1W2PQ64 194 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 A0A1W2PQD8 194 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
HMG20A-206ENST00000558845 FAM205CA6NFA0 338 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 LAD1O00515 517 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 SPTLC2O15270 562 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 TOMM70O94826 608 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 HSD17B4P51659 736 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 SNAP25P60880 206 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 FSTL1Q12841 308 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 STK38Q15208 465 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 USH1GQ495M9 461 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 TTC38Q5R3I4 469 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 GPAT2Q6NUI2 795 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 CCDC174Q6PII3 467 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 MOXD1Q6UVY6 613 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMG20A-206ENST00000558845 NEK8Q86SG6 692 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 MCF2L2Q86YR7 1114 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 RASGRP4Q8TDF6 673 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 CRYGNQ8WXF5 182 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 CLEC4DQ8WXI8 215 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 TEX13BQ9BXU2 312 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 FTOQ9C0B1 505 aaKnown RBP eCLIP12.77□□□□□ -0.37
HMG20A-206ENST00000558845 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
HMG20A-206ENST00000558845 PCDHB6Q9Y5E3 794 aa12.77□□□□□ -0.37
HMG20A-206ENST00000558845 GCOM1H8Y6P7 765 aaPredicted RBP12.76□□□□□ -0.37
HMG20A-206ENST00000558845 POLR2MP0CAP2 368 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 GCFC2P16383 781 aaKnown RBP12.76□□□□□ -0.37
HMG20A-206ENST00000558845 OSBPP22059 807 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 COPB2P35606 906 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 USP11P51784 963 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
HMG20A-206ENST00000558845 ATP2C1P98194 919 aaPredicted RBP12.76□□□□□ -0.37
HMG20A-206ENST00000558845 NOM1Q5C9Z4 860 aaKnown RBP12.76□□□□□ -0.37
HMG20A-206ENST00000558845 ARL6IP4Q66PJ3 421 aaKnown RBP12.76□□□□□ -0.37
HMG20A-206ENST00000558845 ADALQ6DHV7 355 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 PPP4R3AQ6IN85 833 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 GADL1Q6ZQY3 521 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 ANKRD23Q86SG2 305 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 SAPCD2Q86UD0 394 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 AGBL1Q96MI9 1066 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 ZMYND15Q9H091 742 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 RABGAP1Q9Y3P9 1069 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
HMG20A-206ENST00000558845 TLL2Q9Y6L7 1015 aa12.76□□□□□ -0.37
HMG20A-206ENST00000558845 TRAK2O60296 914 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms