RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
SHF-203ENST00000558294 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
SHF-203ENST00000558294 SUPT16HQ9Y5B9 1047 aaKnown RBP12.62□□□□□ -0.39
SHF-203ENST00000558294 LOC102724159A0A0B4J2E5 919 aa12.61□□□□□ -0.39
SHF-203ENST00000558294 NFIBO00712 420 aa12.61□□□□□ -0.39
SHF-203ENST00000558294 SLC16A2P36021 539 aa12.61□□□□□ -0.39
SHF-203ENST00000558294 ALDH5A1P51649 535 aaPredicted RBP12.61□□□□□ -0.39
SHF-203ENST00000558294 PWP2Q15269 919 aaKnown RBP12.61□□□□□ -0.39
SHF-203ENST00000558294 ALX1Q15699 326 aa12.61□□□□□ -0.39
SHF-203ENST00000558294 RPUSD2Q8IZ73 545 aaKnown RBP12.61□□□□□ -0.39
SHF-203ENST00000558294 SCLYQ96I15 445 aa12.61□□□□□ -0.39
SHF-203ENST00000558294 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
SHF-203ENST00000558294 SLC28A3Q9HAS3 691 aa12.61□□□□□ -0.39
SHF-203ENST00000558294 THEGQ9P2T0 379 aa12.61□□□□□ -0.39
SHF-203ENST00000558294 ADD3Q9UEY8 706 aaKnown RBP12.61□□□□□ -0.39
SHF-203ENST00000558294 RBM47A0AV96 593 aaKnown RBP12.6□□□□□ -0.39
SHF-203ENST00000558294 IGFBP4P22692 258 aa12.6□□□□□ -0.39
SHF-203ENST00000558294 RABGGTBP53611 331 aa12.6□□□□□ -0.39
SHF-203ENST00000558294 PURAQ00577 322 aaKnown RBP12.6□□□□□ -0.39
SHF-203ENST00000558294 CCDC85BQ15834 202 aaPredicted RBP12.6□□□□□ -0.39
SHF-203ENST00000558294 SYDE2Q5VT97 1194 aa12.6□□□□□ -0.39
SHF-203ENST00000558294 ASB2Q96Q27 587 aa12.6□□□□□ -0.39
SHF-203ENST00000558294 TMEM47Q9BQJ4 181 aa12.6□□□□□ -0.39
SHF-203ENST00000558294 WDR11Q9BZH6 1224 aa12.6□□□□□ -0.39
SHF-203ENST00000558294 TRMT13Q9NUP7 481 aaKnown RBP12.6□□□□□ -0.39
SHF-203ENST00000558294 POLR3EQ9NVU0 708 aa12.6□□□□□ -0.39
SHF-203ENST00000558294 SLC4A7Q9Y6M7 1214 aa12.6□□□□□ -0.39
SHF-203ENST00000558294 REV3LO60673 3130 aa12.6□□□□□ -0.39
SHF-203ENST00000558294 FRMPD2Q68DX3 1309 aaPredicted RBP12.6□□□□□ -0.39
SHF-203ENST00000558294 PTPDC1A2A3K4 754 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 SUPT20HL2P0C7V6 817 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 TOP1P11387 765 aaKnown RBP12.59□□□□□ -0.39
SHF-203ENST00000558294 CYP2C9P11712 490 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 MYOGP15173 224 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 CPT1AP50416 773 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 PPP2R2DQ66LE6 453 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 SLC30A10Q6XR72 485 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 EVI5LQ96CN4 794 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 MTG1Q9BT17 334 aaPredicted RBP12.59□□□□□ -0.39
SHF-203ENST00000558294 GPCPD1Q9NPB8 672 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 HELLSQ9NRZ9 838 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 TCP11L1Q9NUJ3 509 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 PCDHA11Q9Y5I1 949 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 TNKSO95271 1327 aa12.59□□□□□ -0.39
SHF-203ENST00000558294 SCN10AQ9Y5Y9 1956 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 ZBBXA8MT70 800 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 FGAP02671 866 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 PFKMP08237 780 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 MYL3P08590 195 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 PDHBP11177 359 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 ATP2A2P16615 1042 aaKnown RBP12.58□□□□□ -0.4
SHF-203ENST00000558294 CALML3P27482 149 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 MRPS5P82675 430 aaKnown RBP12.58□□□□□ -0.4
SHF-203ENST00000558294 TTLL4Q14679 1199 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 RRP12Q5JTH9 1297 aaKnown RBP12.58□□□□□ -0.4
SHF-203ENST00000558294 RNF207Q6ZRF8 634 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 OR6J1Q8NGC5 347 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 ADAMTS19Q8TE59 1207 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 ZMYM6O95789 1325 aa12.58□□□□□ -0.4
SHF-203ENST00000558294 TTC28Q96AY4 2481 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 SCN5AQ14524 2016 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 TANC1Q9C0D5 1861 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 A0A0D9SFI3 127 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 SNHG28P0DPA3 235 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 EDNRBP24530 442 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 RPS6P62753 249 aaKnown RBP12.57□□□□□ -0.4
SHF-203ENST00000558294 FAM227BQ96M60 508 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 PNMA2Q9UL42 364 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 XIRP2A4UGR9 3374 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 WDR19Q8NEZ3 1342 aa12.57□□□□□ -0.4
SHF-203ENST00000558294 A6NJR5 290 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 NKRFO15226 690 aaKnown RBP eCLIP12.56□□□□□ -0.4
SHF-203ENST00000558294 HSPD1P10809 573 aaKnown RBP12.56□□□□□ -0.4
SHF-203ENST00000558294 PDE1AP54750 535 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 PDE4DQ08499 809 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 NBPF20Q3BBV1 942 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 ANKRD45Q5TZF3 282 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 NFRKBQ6P4R8 1299 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 DEFB128Q7Z7B8 93 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 SCFD2Q8WU76 684 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 PPP1R13LQ8WUF5 828 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 COPS5Q92905 334 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 TTC14Q96N46 770 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 UHRF1Q96T88 793 aaPredicted RBP12.56□□□□□ -0.4
SHF-203ENST00000558294 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
SHF-203ENST00000558294 RAD50Q92878 1312 aa12.56□□□□□ -0.4
SHF-203ENST00000558294 TRANK1O15050 2925 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 KPNA6O60684 536 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 CA3P07451 260 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 COL9A1P20849 921 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 RFC2P35250 354 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 HAND2P61296 217 aa12.55□□□□□ -0.4
SHF-203ENST00000558294 PTPN11Q06124 597 aaPredicted RBP12.55□□□□□ -0.4
SHF-203ENST00000558294 BRDTQ58F21 947 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms