RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 USP17L24Q0WX57 530 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 IKQ13123 557 aaPredicted RBP14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 C4orf48Q5BLP8 95 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 SYNE3Q6ZMZ3 975 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 ANKRD23Q86SG2 305 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 CCDC144CPQ8IYA2 1237 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 ZNF654Q8IZM8 581 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 SLC12A7Q9Y666 1083 aa14.02□□□□□ -0.17
HMGB1P8-201ENST00000558211 TMEM232C9JQI7 657 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 FLOT1O75955 427 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 CYP2C8P10632 490 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 PDHBP11177 359 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 IRX3P78415 501 aaPredicted RBP14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 TOB2Q14106 344 aaPredicted RBP14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 TAF1CQ15572 869 aaPredicted RBP14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 TTBK2Q6IQ55 1244 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 CATSPERGQ6ZRH7 1159 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 DCAF4Q8WV16 495 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 IL17RAQ96F46 866 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 FBXO28Q9NVF7 368 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 BRPF3Q9ULD4 1205 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 SYNPO2Q9UMS6 1093 aa14.01□□□□□ -0.17
HMGB1P8-201ENST00000558211 TRPA1O75762 1119 aa14□□□□□ -0.17
HMGB1P8-201ENST00000558211 PARP1P09874 1014 aaKnown RBP14□□□□□ -0.17
HMGB1P8-201ENST00000558211 AK2P54819 239 aa14□□□□□ -0.17
HMGB1P8-201ENST00000558211 RABEP1Q15276 862 aa14□□□□□ -0.17
HMGB1P8-201ENST00000558211 MICU3Q86XE3 530 aa14□□□□□ -0.17
HMGB1P8-201ENST00000558211 GMCL1Q96IK5 515 aa14□□□□□ -0.17
HMGB1P8-201ENST00000558211 P2RX7Q99572 595 aaKnown RBP14□□□□□ -0.17
HMGB1P8-201ENST00000558211 OCSTAMPQ9BR26 566 aa14□□□□□ -0.17
HMGB1P8-201ENST00000558211 ASCC2Q9H1I8 757 aaPredicted RBP14□□□□□ -0.17
HMGB1P8-201ENST00000558211 ZBTB43O43298 467 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 TRAK2O60296 914 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 TBC1D8O95759 1140 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 HOXA7P31268 230 aaPredicted RBP13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 SLC16A2P36021 539 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 APOA5Q6Q788 366 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 SGMS1Q86VZ5 419 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 STAG2Q8N3U4 1231 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 CTCFLQ8NI51 663 aaPredicted RBP13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 SMCR8Q8TEV9 937 aaPredicted RBP13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 KIFC2Q96AC6 838 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 MRGPRX2Q96LB1 330 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 UBA5Q9GZZ9 404 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 CPVLQ9H3G5 476 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 RNF186Q9NXI6 227 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 GPSM3Q9Y4H4 160 aa13.99□□□□□ -0.17
HMGB1P8-201ENST00000558211 GOLGA8BA8MQT2 603 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 SIAH2O43255 324 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 DHX16O60231 1041 aaKnown RBP13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 DDAH1O94760 285 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 ALDH1A1P00352 501 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 STAT2P52630 851 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 MAP2K1Q02750 393 aaPredicted RBP13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 ZNF543Q08ER8 600 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 TROAPQ12815 778 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 STK3Q13188 491 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 COG2Q14746 738 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 GRM4Q14833 912 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 BPHLQ86WA6 291 aaPredicted RBP13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 CHURC1Q8WUH1 139 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 AGXT2Q9BYV1 514 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 ZFYVE28Q9HCC9 887 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 VAT1LQ9HCJ6 419 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 FEM1BQ9UK73 627 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 SLC45A1Q9Y2W3 748 aa13.98□□□□□ -0.17
HMGB1P8-201ENST00000558211 GOLGA8AA7E2F4 631 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 KLRF2D3W0D1 207 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 PEX10O60683 326 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 CALM1P0DP23 149 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 CALM2P0DP24 149 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 CALM3P0DP25 149 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 SNHG28P0DPA3 235 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 SNAP25P60880 206 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 HERVK_113P62684 666 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 CCT2P78371 535 aaKnown RBP13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 FOXC1Q12948 553 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 CRHR2Q13324 411 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 ANKRD1Q15327 319 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 CMTR1Q8N1G2 835 aaKnown RBP13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 FBXL16Q8N461 479 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 FANCBQ8NB91 859 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 ATG4CQ96DT6 458 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 SLF1Q9BQI6 1058 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 PAGR1Q9BTK6 254 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 R3HDMLQ9H3Y0 253 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 HOXC10Q9NYD6 342 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 CPA4Q9UI42 421 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 MAD2L2Q9UI95 211 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 CTDP1Q9Y5B0 961 aaPredicted RBP13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 BAZ2BQ9UIF8 2168 aaKnown RBP13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 THSD7BQ9C0I4 1608 aa13.97□□□□□ -0.17
HMGB1P8-201ENST00000558211 PALM3A6NDB9 673 aaPredicted RBP13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 CA12O43570 354 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 VARSP26640 1264 aaKnown RBP13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 PDIA3P30101 505 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms