RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SPATC1LQ9H0A9 340 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 GJB4Q9NTQ9 266 aa14.18□□□□□ -0.14
TPM1-209ENST00000558072 ZNF214Q9UL59 606 aaPredicted RBP14.18□□□□□ -0.14
TPM1-209ENST00000558072 PFASO15067 1338 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 ZNF536O15090 1300 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 BTBD18B2RXH4 712 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 ADAMTS3O15072 1205 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 TRPA1O75762 1119 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 CAP1Q01518 475 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 TMEM132BQ14DG7 1078 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 FAM110CQ1W6H9 321 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.17□□□□□ -0.14
TPM1-209ENST00000558072 RNF146Q9NTX7 359 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 RNF186Q9NXI6 227 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 MORF4L1Q9UBU8 362 aa14.17□□□□□ -0.14
TPM1-209ENST00000558072 STRNO43815 780 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 GCFC2P16383 781 aaKnown RBP14.16□□□□□ -0.14
TPM1-209ENST00000558072 ERVK-9P63128 1117 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 ERVK-24P63145 666 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 Q3C1V9 767 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 MYSM1Q5VVJ2 828 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 FERMT3Q86UX7 667 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 JMYQ8N9B5 988 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 TNPO1Q92973 898 aaKnown RBP14.16□□□□□ -0.14
TPM1-209ENST00000558072 HOMER2Q9NSB8 354 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 RBPJLQ9UBG7 517 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 PCDHA6Q9UN73 950 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 ZDHHC9Q9Y397 364 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 RIPK3Q9Y572 518 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 PCDHA8Q9Y5H6 950 aa14.16□□□□□ -0.14
TPM1-209ENST00000558072 RBBP6Q7Z6E9 1792 aaKnown RBP14.16□□□□□ -0.14
TPM1-209ENST00000558072 LOC102724159A0A0B4J2E5 919 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 M0R2N6 131 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 CA12O43570 354 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 CFBP00751 764 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 MAPK4P31152 587 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 CLK2P49760 499 aaKnown RBP14.15□□□□□ -0.14
TPM1-209ENST00000558072 HSD17B4P51659 736 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 USP11P51784 963 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 PKP1Q13835 747 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 PWP2Q15269 919 aaKnown RBP14.15□□□□□ -0.14
TPM1-209ENST00000558072 MUM1L1Q5H9M0 696 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 XRRA1Q6P2D8 792 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 RNF207Q6ZRF8 634 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 ABRAQ8N0Z2 381 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 SLC5A4Q9NY91 659 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 LCTP09848 1927 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 PLXNB2O15031 1838 aa14.15□□□□□ -0.14
TPM1-209ENST00000558072 LAD1O00515 517 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 MEIS2O14770 477 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 TLR2O60603 784 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 CTGFP29279 349 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 KCTD2Q14681 263 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 NPY5RQ15761 445 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 FOXD4L5Q5VV16 416 aaPredicted RBP14.14□□□□□ -0.15
TPM1-209ENST00000558072 MOXD1Q6UVY6 613 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 PIK3AP1Q6ZUJ8 805 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 NEK8Q86SG6 692 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 NCAPG2Q86XI2 1143 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 ANKRD35Q8N283 1001 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 CLEC4DQ8WXI8 215 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 FOXD4L4Q8WXT5 416 aaPredicted RBP14.14□□□□□ -0.15
TPM1-209ENST00000558072 TNFRSF25Q93038 417 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 ARHGAP39Q9C0H5 1083 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 PORCNQ9H237 461 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 POLR3EQ9NVU0 708 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 BIN2Q9UBW5 565 aaPredicted RBP14.14□□□□□ -0.15
TPM1-209ENST00000558072 ADD3Q9UEY8 706 aaKnown RBP14.14□□□□□ -0.15
TPM1-209ENST00000558072 MORC2Q9Y6X9 1032 aaPredicted RBP14.14□□□□□ -0.15
TPM1-209ENST00000558072 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
TPM1-209ENST00000558072 YEATS4O95619 227 aa14.13□□□□□ -0.15
TPM1-209ENST00000558072 FCER1AP12319 257 aa14.13□□□□□ -0.15
TPM1-209ENST00000558072 NCLP19338 710 aaKnown RBP14.13□□□□□ -0.15
TPM1-209ENST00000558072 NR5A1Q13285 461 aa14.13□□□□□ -0.15
TPM1-209ENST00000558072 JAKMIP3Q5VZ66 844 aa14.13□□□□□ -0.15
TPM1-209ENST00000558072 DNERQ8NFT8 737 aa14.13□□□□□ -0.15
TPM1-209ENST00000558072 KCNG4Q8TDN1 519 aa14.13□□□□□ -0.15
TPM1-209ENST00000558072 MOV10L1Q9BXT6 1211 aaKnown RBP14.13□□□□□ -0.15
TPM1-209ENST00000558072 EFCC1Q9HA90 598 aa14.13□□□□□ -0.15
TPM1-209ENST00000558072 RTEL1Q9NZ71 1219 aa14.13□□□□□ -0.15
TPM1-209ENST00000558072 MGAMO43451 1857 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 DDX11L8A8MPP1 907 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 NFIBO00712 420 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 STAM2O75886 525 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 BAG4O95429 457 aaKnown RBP14.12□□□□□ -0.15
TPM1-209ENST00000558072 BCRP11274 1271 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 ERCC3P19447 782 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 SREBF1P36956 1147 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 ARHGEF6Q15052 776 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 SF3A1Q15459 793 aaKnown RBP14.12□□□□□ -0.15
TPM1-209ENST00000558072 WDR78Q5VTH9 848 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 PPP4R3AQ6IN85 833 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 NSMFQ6X4W1 530 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 OXER1Q8TDS5 423 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 NSUN6Q8TEA1 469 aaKnown RBP14.12□□□□□ -0.15
TPM1-209ENST00000558072 TBCKQ8TEA7 893 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 TBC1D5Q92609 795 aa14.12□□□□□ -0.15
TPM1-209ENST00000558072 PURBQ96QR8 312 aaKnown RBP14.12□□□□□ -0.15
TPM1-209ENST00000558072 IWS1Q96ST2 819 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms