RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PTMSP20962 102 aa19.25■□□□□ 0.67
SNX1-203ENST00000558040 MCM4P33991 863 aa19.25■□□□□ 0.67
SNX1-203ENST00000558040 GHRHRQ02643 423 aa19.25■□□□□ 0.67
SNX1-203ENST00000558040 EARS2Q5JPH6 523 aaKnown RBP19.25■□□□□ 0.67
SNX1-203ENST00000558040 ANO1Q5XXA6 986 aa19.25■□□□□ 0.67
SNX1-203ENST00000558040 CHAMP1Q96JM3 812 aa19.25■□□□□ 0.67
SNX1-203ENST00000558040 SPATA32Q96LK8 384 aa19.25■□□□□ 0.67
SNX1-203ENST00000558040 PTPN18Q99952 460 aa19.25■□□□□ 0.67
SNX1-203ENST00000558040 ACAD9Q9H845 621 aa19.25■□□□□ 0.67
SNX1-203ENST00000558040 CEP131Q9UPN4 1083 aa19.25■□□□□ 0.67
SNX1-203ENST00000558040 RBBP6Q7Z6E9 1792 aaKnown RBP19.24■□□□□ 0.67
SNX1-203ENST00000558040 FAM205CA6NFA0 338 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 RASSF10A6NK89 507 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 NFIBO00712 420 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 YEATS4O95619 227 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 BMP15O95972 392 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 NASPP49321 788 aaPredicted RBP19.24■□□□□ 0.67
SNX1-203ENST00000558040 HSD17B4P51659 736 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 INF2Q27J81 1249 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 DEFB115Q30KQ5 88 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 NOM1Q5C9Z4 860 aaKnown RBP19.24■□□□□ 0.67
SNX1-203ENST00000558040 MUM1L1Q5H9M0 696 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 TTC38Q5R3I4 469 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 TBCKQ8TEA7 893 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 ANO3Q9BYT9 981 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 RIPK3Q9Y572 518 aa19.24■□□□□ 0.67
SNX1-203ENST00000558040 CNMDO75829 334 aa19.23■□□□□ 0.67
SNX1-203ENST00000558040 ATP2B1P20020 1258 aa19.23■□□□□ 0.67
SNX1-203ENST00000558040 HOXA13P31271 388 aaPredicted RBP19.23■□□□□ 0.67
SNX1-203ENST00000558040 TOB1P50616 345 aaPredicted RBP19.23■□□□□ 0.67
SNX1-203ENST00000558040 CCNA1P78396 465 aa19.23■□□□□ 0.67
SNX1-203ENST00000558040 CEBPZQ03701 1054 aaKnown RBP19.23■□□□□ 0.67
SNX1-203ENST00000558040 NOGQ13253 232 aa19.23■□□□□ 0.67
SNX1-203ENST00000558040 STK38Q15208 465 aa19.23■□□□□ 0.67
SNX1-203ENST00000558040 NEK8Q86SG6 692 aa19.23■□□□□ 0.67
SNX1-203ENST00000558040 IFNL1Q8IU54 200 aa19.23■□□□□ 0.67
SNX1-203ENST00000558040 TMEM87AQ8NBN3 555 aa19.23■□□□□ 0.67
SNX1-203ENST00000558040 NAP1L4Q99733 375 aaKnown RBP19.23■□□□□ 0.67
SNX1-203ENST00000558040 RBPJLQ9UBG7 517 aa19.23■□□□□ 0.67
SNX1-203ENST00000558040 ERVK-9P63128 1117 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 ERVK-24P63145 666 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 GRM1Q13255 1194 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 ORC2Q13416 577 aaPredicted RBP19.22■□□□□ 0.67
SNX1-203ENST00000558040 SF3A1Q15459 793 aaKnown RBP19.22■□□□□ 0.67
SNX1-203ENST00000558040 NFKBIBQ15653 356 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 CYP4F22Q6NT55 531 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 POTEEQ6S8J3 1075 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 NSMFQ6X4W1 530 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 RNF207Q6ZRF8 634 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 FCHSD1Q86WN1 690 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 REM2Q8IYK8 340 aaPredicted RBP19.22■□□□□ 0.67
SNX1-203ENST00000558040 GPRC5AQ8NFJ5 357 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 KCNG4Q8TDN1 519 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 LEO1Q8WVC0 666 aaPredicted RBP19.22■□□□□ 0.67
SNX1-203ENST00000558040 PGBD1Q96JS3 809 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 MOV10L1Q9BXT6 1211 aaKnown RBP19.22■□□□□ 0.67
SNX1-203ENST00000558040 FTOQ9C0B1 505 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX1-203ENST00000558040 CLIC4Q9Y696 253 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 ELP1O95163 1332 aa19.22■□□□□ 0.67
SNX1-203ENST00000558040 IGF2BP3O00425 579 aaKnown RBP eCLIP19.21■□□□□ 0.67
SNX1-203ENST00000558040 TAF1CQ15572 869 aaPredicted RBP19.21■□□□□ 0.67
SNX1-203ENST00000558040 NCAPG2Q86XI2 1143 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 JMYQ8N9B5 988 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 LINC00301Q8NCQ3 95 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 SHCBP1Q8NEM2 672 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 TBC1D5Q92609 795 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 CAPNS2Q96L46 248 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 MROH8Q9H579 483 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 GDPD2Q9HCC8 539 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 TXNRD2Q9NNW7 524 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.21■□□□□ 0.67
SNX1-203ENST00000558040 MORF4L1Q9UBU8 362 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 RCOR1Q9UKL0 485 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 PCDHB6Q9Y5E3 794 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 PFASO15067 1338 aa19.21■□□□□ 0.67
SNX1-203ENST00000558040 SMCHD1A6NHR9 2005 aa19.2■□□□□ 0.66
SNX1-203ENST00000558040 TCHHQ07283 1943 aa19.2■□□□□ 0.66
SNX1-203ENST00000558040 GCFC2P16383 781 aaKnown RBP19.2■□□□□ 0.66
SNX1-203ENST00000558040 SREBF1P36956 1147 aa19.2■□□□□ 0.66
SNX1-203ENST00000558040 TM4SF4P48230 202 aa19.2■□□□□ 0.66
SNX1-203ENST00000558040 USP11P51784 963 aa19.2■□□□□ 0.66
SNX1-203ENST00000558040 RPS6P62753 249 aaKnown RBP19.2■□□□□ 0.66
SNX1-203ENST00000558040 NBR1Q14596 966 aa19.2■□□□□ 0.66
SNX1-203ENST00000558040 SLC39A14Q15043 492 aa19.2■□□□□ 0.66
SNX1-203ENST00000558040 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
SNX1-203ENST00000558040 SPTLC2O15270 562 aa19.19■□□□□ 0.66
SNX1-203ENST00000558040 PRPF40AO75400 957 aaKnown RBP19.19■□□□□ 0.66
SNX1-203ENST00000558040 ALDH1A1P00352 501 aa19.19■□□□□ 0.66
SNX1-203ENST00000558040 ERCC3P19447 782 aa19.19■□□□□ 0.66
SNX1-203ENST00000558040 MCM7P33993 719 aa19.19■□□□□ 0.66
SNX1-203ENST00000558040 ZNF174Q15697 407 aa19.19■□□□□ 0.66
SNX1-203ENST00000558040 FAM110CQ1W6H9 321 aa19.19■□□□□ 0.66
SNX1-203ENST00000558040 SLC30A10Q6XR72 485 aa19.19■□□□□ 0.66
SNX1-203ENST00000558040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNX1-203ENST00000558040 ANKRD35Q8N283 1001 aa19.19■□□□□ 0.66
SNX1-203ENST00000558040 ANKRD13CQ8N6S4 541 aa19.19■□□□□ 0.66
SNX1-203ENST00000558040 SYTL5Q8TDW5 730 aaPredicted RBP19.19■□□□□ 0.66
SNX1-203ENST00000558040 MORC2Q9Y6X9 1032 aaPredicted RBP19.19■□□□□ 0.66
SNX1-203ENST00000558040 GOLGA6L4A6NEF3 574 aa19.18■□□□□ 0.66
SNX1-203ENST00000558040 CCNT1O60563 726 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms