RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 CYP2B6P20813 491 aa24.46■■□□□ 1.51
CASC4-204ENST00000557945 RGS2P41220 211 aa24.46■■□□□ 1.51
CASC4-204ENST00000557945 FLT3LGP49771 235 aa24.46■■□□□ 1.51
CASC4-204ENST00000557945 FOSBP53539 338 aa24.46■■□□□ 1.51
CASC4-204ENST00000557945 CCDC148Q8NFR7 591 aa24.46■■□□□ 1.51
CASC4-204ENST00000557945 ADCY7P51828 1080 aa24.45■■□□□ 1.5
CASC4-204ENST00000557945 NLRP5P59047 1200 aa24.45■■□□□ 1.5
CASC4-204ENST00000557945 RPS6P62753 249 aaKnown RBP24.45■■□□□ 1.5
CASC4-204ENST00000557945 CUL5Q93034 780 aa24.45■■□□□ 1.5
CASC4-204ENST00000557945 SH3GLB2Q9NR46 395 aa24.45■■□□□ 1.5
CASC4-204ENST00000557945 FOXD4L1Q9NU39 408 aa24.45■■□□□ 1.5
CASC4-204ENST00000557945 SLC5A4Q9NY91 659 aa24.45■■□□□ 1.5
CASC4-204ENST00000557945 DOCK3Q8IZD9 2030 aa24.45■■□□□ 1.5
CASC4-204ENST00000557945 COBLO75128 1261 aa24.44■■□□□ 1.5
CASC4-204ENST00000557945 HSP90AA1P07900 732 aaKnown RBP24.44■■□□□ 1.5
CASC4-204ENST00000557945 HOXA13P31271 388 aaPredicted RBP24.44■■□□□ 1.5
CASC4-204ENST00000557945 MRPL12P52815 198 aaKnown RBP24.44■■□□□ 1.5
CASC4-204ENST00000557945 CTU1Q7Z7A3 348 aaKnown RBP24.44■■□□□ 1.5
CASC4-204ENST00000557945 RAET1EQ8TD07 263 aa24.44■■□□□ 1.5
CASC4-204ENST00000557945 USP6NLQ92738 828 aa24.44■■□□□ 1.5
CASC4-204ENST00000557945 C6orf50Q9HD87 102 aa24.44■■□□□ 1.5
CASC4-204ENST00000557945 PRDM10Q9NQV6 1147 aa24.44■■□□□ 1.5
CASC4-204ENST00000557945 HSD17B4P51659 736 aa24.43■■□□□ 1.5
CASC4-204ENST00000557945 PRMT2P55345 433 aa24.43■■□□□ 1.5
CASC4-204ENST00000557945 CNTN2Q02246 1040 aa24.43■■□□□ 1.5
CASC4-204ENST00000557945 BECN1Q14457 450 aa24.43■■□□□ 1.5
CASC4-204ENST00000557945 MAF1Q9H063 256 aa24.43■■□□□ 1.5
CASC4-204ENST00000557945 RIC8AQ9NPQ8 531 aa24.43■■□□□ 1.5
CASC4-204ENST00000557945 KIF3AQ9Y496 699 aa24.43■■□□□ 1.5
CASC4-204ENST00000557945 DNAJC25-GNG10A0A024R161 153 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 GJB2P29033 226 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 TRIM29Q14134 588 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 UBE2SQ16763 222 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 USP17L6PQ6QN14 398 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 FCHSD1Q86WN1 690 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 SAMD3Q8N6K7 520 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 NPLOC4Q8TAT6 608 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 SYTL5Q8TDW5 730 aaPredicted RBP24.42■■□□□ 1.5
CASC4-204ENST00000557945 SHISA4Q96DD7 197 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 PURBQ96QR8 312 aaKnown RBP24.42■■□□□ 1.5
CASC4-204ENST00000557945 APBA2Q99767 749 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 GLT8D2Q9H1C3 349 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 GJB4Q9NTQ9 266 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 MAP3K20Q9NYL2 800 aaKnown RBP24.42■■□□□ 1.5
CASC4-204ENST00000557945 ESYT2A0FGR8 921 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 GNA11P29992 359 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 ZNF792Q3KQV3 632 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 FAM133AQ8N9E0 248 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 INTS4Q96HW7 963 aaKnown RBP24.42■■□□□ 1.5
CASC4-204ENST00000557945 ZMYND12Q9H0C1 365 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 KCNJ14Q9UNX9 436 aa24.42■■□□□ 1.5
CASC4-204ENST00000557945 MEIS2O14770 477 aa24.41■■□□□ 1.5
CASC4-204ENST00000557945 GHRHRQ02643 423 aa24.41■■□□□ 1.5
CASC4-204ENST00000557945 C8orf76Q96K31 380 aa24.41■■□□□ 1.5
CASC4-204ENST00000557945 COL20A1Q9P218 1284 aa24.41■■□□□ 1.5
CASC4-204ENST00000557945 ZNF236Q9UL36 1845 aa24.4■■□□□ 1.5
CASC4-204ENST00000557945 ZNFX1Q9P2E3 1918 aaKnown RBP24.4■■□□□ 1.5
CASC4-204ENST00000557945 PIK3CDO00329 1044 aa24.4■■□□□ 1.5
CASC4-204ENST00000557945 HOXC6P09630 235 aa24.4■■□□□ 1.5
CASC4-204ENST00000557945 XRCC5P13010 732 aaKnown RBP24.4■■□□□ 1.5
CASC4-204ENST00000557945 IRF5Q13568 498 aa24.4■■□□□ 1.5
CASC4-204ENST00000557945 FAM177A1Q8N128 213 aaPredicted RBP24.4■■□□□ 1.5
CASC4-204ENST00000557945 BICD2Q8TD16 824 aa24.4■■□□□ 1.5
CASC4-204ENST00000557945 TAAR1Q96RJ0 339 aa24.4■■□□□ 1.5
CASC4-204ENST00000557945 ADD3Q9UEY8 706 aaKnown RBP24.4■■□□□ 1.5
CASC4-204ENST00000557945 DIS3Q9Y2L1 958 aaKnown RBP24.4■■□□□ 1.5
CASC4-204ENST00000557945 PTPN22Q9Y2R2 807 aa24.4■■□□□ 1.5
CASC4-204ENST00000557945 PTCH2Q9Y6C5 1203 aa24.4■■□□□ 1.5
CASC4-204ENST00000557945 RBBP6Q7Z6E9 1792 aaKnown RBP24.39■■□□□ 1.5
CASC4-204ENST00000557945 SOWAHBA6NEL2 793 aa24.39■■□□□ 1.49
CASC4-204ENST00000557945 ANP32AP39687 249 aaKnown RBP24.39■■□□□ 1.49
CASC4-204ENST00000557945 GUCY1B3Q02153 619 aa24.39■■□□□ 1.49
CASC4-204ENST00000557945 CCL14Q16627 93 aa24.39■■□□□ 1.49
CASC4-204ENST00000557945 SPRYD3Q8NCJ5 442 aa24.39■■□□□ 1.49
CASC4-204ENST00000557945 MAML3Q96JK9 1138 aa24.39■■□□□ 1.49
CASC4-204ENST00000557945 PHF20Q9BVI0 1012 aa24.39■■□□□ 1.49
CASC4-204ENST00000557945 BIN2Q9UBW5 565 aaPredicted RBP24.39■■□□□ 1.49
CASC4-204ENST00000557945 SPDYE3A6NKU9 549 aa24.38■■□□□ 1.49
CASC4-204ENST00000557945 ADCY3O60266 1144 aa24.38■■□□□ 1.49
CASC4-204ENST00000557945 KRT40Q6A162 431 aa24.38■■□□□ 1.49
CASC4-204ENST00000557945 REXO1Q8N1G1 1221 aaKnown RBP24.38■■□□□ 1.49
CASC4-204ENST00000557945 RMDN3Q96TC7 470 aa24.38■■□□□ 1.49
CASC4-204ENST00000557945 TSHZ2Q9NRE2 1034 aa24.38■■□□□ 1.49
CASC4-204ENST00000557945 TMEM260Q9NX78 707 aa24.38■■□□□ 1.49
CASC4-204ENST00000557945 PCDHA4Q9UN74 947 aa24.38■■□□□ 1.49
CASC4-204ENST00000557945 ADAMTS3O15072 1205 aa24.37■■□□□ 1.49
CASC4-204ENST00000557945 ELNP15502 786 aa24.37■■□□□ 1.49
CASC4-204ENST00000557945 ARHGEF16Q5VV41 709 aa24.37■■□□□ 1.49
CASC4-204ENST00000557945 JAKMIP3Q5VZ66 844 aa24.37■■□□□ 1.49
CASC4-204ENST00000557945 GALNT17Q6IS24 598 aa24.37■■□□□ 1.49
CASC4-204ENST00000557945 TEX2Q8IWB9 1127 aa24.37■■□□□ 1.49
CASC4-204ENST00000557945 NSUN6Q8TEA1 469 aaKnown RBP24.37■■□□□ 1.49
CASC4-204ENST00000557945 FGD4Q96M96 766 aa24.37■■□□□ 1.49
CASC4-204ENST00000557945 EIF2AK2P19525 551 aaKnown RBP24.36■■□□□ 1.49
CASC4-204ENST00000557945 ALDH5A1P51649 535 aaPredicted RBP24.36■■□□□ 1.49
CASC4-204ENST00000557945 PKN2Q16513 984 aaKnown RBP24.36■■□□□ 1.49
CASC4-204ENST00000557945 ZNF467Q7Z7K2 595 aaPredicted RBP24.36■■□□□ 1.49
CASC4-204ENST00000557945 TRMT44Q8IYL2 757 aaKnown RBP24.36■■□□□ 1.49
CASC4-204ENST00000557945 BLIDQ8IZY5 108 aa24.36■■□□□ 1.49
CASC4-204ENST00000557945 DNERQ8NFT8 737 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms