RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 MDM2Q00987 491 aaPredicted RBP19.47■□□□□ 0.71
NEDD4-212ENST00000557845 NECTIN1Q15223 517 aa19.47■□□□□ 0.71
NEDD4-212ENST00000557845 FBXO11Q86XK2 927 aa19.47■□□□□ 0.71
NEDD4-212ENST00000557845 DNERQ8NFT8 737 aa19.47■□□□□ 0.71
NEDD4-212ENST00000557845 TBC1D5Q92609 795 aa19.47■□□□□ 0.71
NEDD4-212ENST00000557845 STARD7Q9NQZ5 370 aa19.47■□□□□ 0.71
NEDD4-212ENST00000557845 LRRC37A2A6NM11 1700 aa19.47■□□□□ 0.71
NEDD4-212ENST00000557845 SLC27A2O14975 620 aa19.46■□□□□ 0.71
NEDD4-212ENST00000557845 CTAGE5O15320 804 aa19.46■□□□□ 0.71
NEDD4-212ENST00000557845 ASGR1P07306 291 aa19.46■□□□□ 0.71
NEDD4-212ENST00000557845 TLE2Q04725 743 aa19.46■□□□□ 0.71
NEDD4-212ENST00000557845 GRM4Q14833 912 aa19.46■□□□□ 0.71
NEDD4-212ENST00000557845 TMEM67Q5HYA8 995 aa19.46■□□□□ 0.71
NEDD4-212ENST00000557845 MTMR8Q96EF0 704 aa19.46■□□□□ 0.71
NEDD4-212ENST00000557845 LBHD1Q9BQE6 289 aaPredicted RBP19.46■□□□□ 0.71
NEDD4-212ENST00000557845 UBE2OQ9C0C9 1292 aaKnown RBP19.46■□□□□ 0.71
NEDD4-212ENST00000557845 ANO2Q9NQ90 1003 aa19.46■□□□□ 0.71
NEDD4-212ENST00000557845 MRPL11Q9Y3B7 192 aaKnown RBP19.46■□□□□ 0.71
NEDD4-212ENST00000557845 Q9Y3F1 56 aa19.46■□□□□ 0.71
NEDD4-212ENST00000557845 DYNC1LI2O43237 492 aaPredicted RBP19.45■□□□□ 0.7
NEDD4-212ENST00000557845 TROAPQ12815 778 aa19.45■□□□□ 0.7
NEDD4-212ENST00000557845 TMEM63BQ5T3F8 832 aa19.45■□□□□ 0.7
NEDD4-212ENST00000557845 MCF2L2Q86YR7 1114 aa19.45■□□□□ 0.7
NEDD4-212ENST00000557845 GLT1D1Q96MS3 346 aa19.45■□□□□ 0.7
NEDD4-212ENST00000557845 MPHOSPH6Q99547 160 aaKnown RBP19.45■□□□□ 0.7
NEDD4-212ENST00000557845 MTA3Q9BTC8 594 aa19.45■□□□□ 0.7
NEDD4-212ENST00000557845 AMNQ9BXJ7 453 aa19.45■□□□□ 0.7
NEDD4-212ENST00000557845 AP5M1Q9H0R1 490 aa19.45■□□□□ 0.7
NEDD4-212ENST00000557845 ELP1O95163 1332 aa19.45■□□□□ 0.7
NEDD4-212ENST00000557845 B4DLN1 442 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 EDNRBP24530 442 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 MRPL12P52815 198 aaKnown RBP19.44■□□□□ 0.7
NEDD4-212ENST00000557845 BEX3Q00994 111 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 PDE4DQ08499 809 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 CREB3L3Q68CJ9 461 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 SH3RF1Q7Z6J0 888 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 CATIPQ7Z7H3 387 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 TLK2Q86UE8 772 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 RIOX1Q9H6W3 641 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 PRDM5Q9NQX1 630 aaPredicted RBP19.44■□□□□ 0.7
NEDD4-212ENST00000557845 PDLIM7Q9NR12 457 aa19.44■□□□□ 0.7
NEDD4-212ENST00000557845 RBM47A0AV96 593 aaKnown RBP19.43■□□□□ 0.7
NEDD4-212ENST00000557845 TRIM43BA6NCK2 446 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 ZBTB5O15062 677 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 PRC1O43663 620 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 PTGS1P23219 599 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 MCM5P33992 734 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 DUSP28Q4G0W2 176 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 CASC1Q6TDU7 716 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 ANKRD33Q7Z3H0 272 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 TDHQ8IZJ6 230 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 VTI1AQ96AJ9 217 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 TRIM43Q96BQ3 446 aaPredicted RBP19.43■□□□□ 0.7
NEDD4-212ENST00000557845 TOX2Q96NM4 488 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 TAAR1Q96RJ0 339 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 WDR11Q9BZH6 1224 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 LY9Q9HBG7 655 aa19.43■□□□□ 0.7
NEDD4-212ENST00000557845 LTBP2Q14767 1821 aa19.42■□□□□ 0.7
NEDD4-212ENST00000557845 PQBP1O60828 265 aaKnown RBP19.42■□□□□ 0.7
NEDD4-212ENST00000557845 PPP1R11O60927 126 aaPredicted RBP19.42■□□□□ 0.7
NEDD4-212ENST00000557845 CLTBP09497 229 aa19.42■□□□□ 0.7
NEDD4-212ENST00000557845 CDK7P50613 346 aa19.42■□□□□ 0.7
NEDD4-212ENST00000557845 FSCN1Q16658 493 aaKnown RBP19.42■□□□□ 0.7
NEDD4-212ENST00000557845 SLC35G1Q2M3R5 365 aa19.42■□□□□ 0.7
NEDD4-212ENST00000557845 TMTC2Q8N394 836 aa19.42■□□□□ 0.7
NEDD4-212ENST00000557845 SYTL5Q8TDW5 730 aaPredicted RBP19.42■□□□□ 0.7
NEDD4-212ENST00000557845 TMEM87BQ96K49 555 aa19.42■□□□□ 0.7
NEDD4-212ENST00000557845 MAP3K14Q99558 947 aa19.42■□□□□ 0.7
NEDD4-212ENST00000557845 GPHNQ9NQX3 736 aaPredicted RBP19.42■□□□□ 0.7
NEDD4-212ENST00000557845 PCDHA1Q9Y5I3 950 aa19.42■□□□□ 0.7
NEDD4-212ENST00000557845 TRIOBPQ9H2D6 2365 aa19.42■□□□□ 0.7
NEDD4-212ENST00000557845 RANBP2P49792 3224 aaKnown RBP19.42■□□□□ 0.7
NEDD4-212ENST00000557845 CYTH3O43739 400 aa19.41■□□□□ 0.7
NEDD4-212ENST00000557845 ZEB2O60315 1214 aa19.41■□□□□ 0.7
NEDD4-212ENST00000557845 CDC45O75419 566 aa19.41■□□□□ 0.7
NEDD4-212ENST00000557845 FAAP100Q0VG06 881 aa19.41■□□□□ 0.7
NEDD4-212ENST00000557845 COL9A3Q14050 684 aaPredicted RBP19.41■□□□□ 0.7
NEDD4-212ENST00000557845 NSUN6Q8TEA1 469 aaKnown RBP19.41■□□□□ 0.7
NEDD4-212ENST00000557845 PIGSQ96S52 555 aa19.41■□□□□ 0.7
NEDD4-212ENST00000557845 COL20A1Q9P218 1284 aa19.41■□□□□ 0.7
NEDD4-212ENST00000557845 BAZ2BQ9UIF8 2168 aaKnown RBP19.4■□□□□ 0.7
NEDD4-212ENST00000557845 A0A0U1RQG5 324 aaPredicted RBP19.4■□□□□ 0.7
NEDD4-212ENST00000557845 DCDC2CA8MYV0 355 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 ARVCFO00192 962 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 SOX1O00570 391 aaPredicted RBP19.4■□□□□ 0.7
NEDD4-212ENST00000557845 OPLAHO14841 1288 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 CFBP00751 764 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 RNF20Q5VTR2 975 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 CXCL17Q6UXB2 119 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 HOMER1Q86YM7 354 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 ZNF654Q8IZM8 581 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 BADQ92934 168 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 TMEM39AQ9NV64 488 aa19.4■□□□□ 0.7
NEDD4-212ENST00000557845 MAP3K20Q9NYL2 800 aaKnown RBP19.4■□□□□ 0.7
NEDD4-212ENST00000557845 PNMA6FA0A0J9YX94 578 aa19.39■□□□□ 0.69
NEDD4-212ENST00000557845 SH2B2O14492 632 aaPredicted RBP19.39■□□□□ 0.69
NEDD4-212ENST00000557845 KIAA0355O15063 1070 aa19.39■□□□□ 0.69
NEDD4-212ENST00000557845 CABYRO75952 493 aa19.39■□□□□ 0.69
NEDD4-212ENST00000557845 HSD17B4P51659 736 aa19.39■□□□□ 0.69
NEDD4-212ENST00000557845 GHRHRQ02643 423 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms