RNA–Protein interactions for RNA: ENST00000557589.1

TIMELESS-205, Transcript of timeless circadian regulator, humanhuman

TSL 2

Gene TIMELESS, Length 2,784 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-205ENST00000557589 NOM1Q5C9Z4 860 aaKnown RBP11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 NEK8Q86SG6 692 aa11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 IRF2BP1Q8IU81 584 aa11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 TXLNBQ8N3L3 684 aa11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 SH3RF3Q8TEJ3 882 aaPredicted RBP11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 ERGIC2Q96RQ1 377 aa11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 RAB34Q9BZG1 259 aa11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 EDEM3Q9BZQ6 932 aa11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 TSGA10Q9BZW7 698 aa11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 PSD3Q9NYI0 1048 aa11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 SUFUQ9UMX1 484 aa11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 EPN1Q9Y6I3 576 aaPredicted RBP11.33□□□□□ -0.6
TIMELESS-205ENST00000557589 MAP2K7O14733 419 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 GNPATO15228 680 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 MAFGO15525 162 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 NDUFA10O95299 355 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 TBC1D8O95759 1140 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 HNRNPH3P31942 346 aaKnown RBP11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 CYLC1P35663 651 aaPredicted RBP11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 ARHGAP25P42331 645 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 ERVK-24P63145 666 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 UBXN1Q04323 297 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 BIRC2Q13490 618 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 PDIA5Q14554 519 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 ASPRV1Q53RT3 343 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 HSP90AA4PQ58FG1 418 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 CABP7Q86V35 215 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 DESI2Q9BSY9 194 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 PARD6BQ9BYG5 372 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 BLZF1Q9H2G9 400 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 SEC63Q9UGP8 760 aaKnown RBP11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 KLRF2D3W0D1 207 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 PSMD2Q13200 908 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 KARSQ15046 597 aaKnown RBP11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 ZNF569Q5MCW4 686 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 SOGA3Q5TF21 947 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 WDR93Q6P2C0 686 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 SMYD4Q8IYR2 804 aaPredicted RBP11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 P2RX5Q93086 422 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 CALML4Q96GE6 196 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 TTYH3Q9C0H2 523 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 GLT8D2Q9H1C3 349 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 EXOC1Q9NV70 894 aa11.32□□□□□ -0.6
TIMELESS-205ENST00000557589 CYTH3O43739 400 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 BBOX1O75936 387 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 HNRNPH2P55795 449 aaKnown RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 ZBED6P86452 979 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 AMPD2Q01433 879 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 MTF1Q14872 753 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 TRIM9Q9C026 710 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 ANKIB1Q9P2G1 1089 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 CCNL1Q9UK58 526 aaPredicted RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 CTAGE15A4D2H0 777 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 WTIPA6NIX2 430 aaPredicted RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 EIF3CLB5ME19 914 aaKnown RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 EIF3JO75822 258 aaKnown RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 CTAGE8P0CG41 777 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 CCT6AP40227 531 aaKnown RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 CDK8P49336 464 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 CKAP4Q07065 602 aaKnown RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 TYW1BQ6NUM6 668 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 BICDL1Q6ZP65 573 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 HEATR3Q7Z4Q2 680 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 CTAGE6Q86UF2 777 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 CTAGE4Q8IX94 777 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 ARHGEF1Q92888 912 aaKnown RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 TRIM47Q96LD4 638 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 EYA3Q99504 573 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 EIF3CQ99613 913 aaKnown RBP11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 FUT8Q9BYC5 575 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 VPS16Q9H269 839 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 ACBD3Q9H3P7 528 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 TAB2Q9NYJ8 693 aa11.31□□□□□ -0.6
TIMELESS-205ENST00000557589 TARSL2A2RTX5 802 aaKnown RBP11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 SNHG28P0DPA3 235 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 CASP1P29466 404 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 CYP2C19P33261 490 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 NAPAP54920 295 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 LRRC63Q05C16 580 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 ITIH3Q06033 890 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 INF2Q27J81 1249 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 TRAPPC3LQ5T215 181 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 PAPD7Q5XG87 772 aaKnown RBP11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 MCTP2Q6DN12 878 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 HDXQ7Z353 690 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 TMEM60Q9H2L4 133 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 LZTFL1Q9NQ48 299 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 SWAP70Q9UH65 585 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 TNS1Q9HBL0 1735 aaKnown RBP11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 KRT86O43790 486 aa11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 IPO7O95373 1038 aaKnown RBP11.3□□□□□ -0.6
TIMELESS-205ENST00000557589 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms