RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 CIAO1O76071 339 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 BAG3O95817 575 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 ASGR1P07306 291 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 TAL1P17542 331 aaPredicted RBP8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 CST5P28325 142 aaPredicted RBP8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 ADORA1P30542 326 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 SLC19A1P41440 591 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 RFX5P48382 616 aaPredicted RBP8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 GRB10Q13322 594 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 COG2Q14746 738 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 RAB3GAP1Q15042 981 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 NR6A1Q15406 480 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 CCDC27Q2M243 656 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 LEXMQ3ZCV2 418 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 HFE2Q6ZVN8 426 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 PRRX2Q99811 253 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 SIL1Q9H173 461 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 UBE2ZQ9H832 354 aaPredicted RBP8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 SPC25Q9HBM1 224 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 LMCD1Q9NZU5 365 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 RAI14Q9P0K7 980 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 FAM184BQ9ULE4 1060 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 DIS3Q9Y2L1 958 aaKnown RBP8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 ZNF536O15090 1300 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 FLT1P17948 1338 aa8.27□□□□□ -1.09
SPTLC2-206ENST00000557566 COL11A1P12107 1806 aaPredicted RBP8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 KIF28PB7ZC32 967 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 DUSP11O75319 330 aaKnown RBP8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 CD4P01730 458 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 C6orf222P0C671 652 aaPredicted RBP8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 IL9P15248 144 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 CCL23P55773 120 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 TAP1Q03518 808 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 PTCRAQ6ISU1 281 aaPredicted RBP8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 ERMP1Q7Z2K6 904 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 MAPKAPK5Q8IW41 473 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 ACER1Q8TDN7 264 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 TGFBRAP1Q8WUH2 860 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 MMP19Q99542 508 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 TANGO6Q9C0B7 1094 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 EVA1BQ9NVM1 165 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 MAP10Q9P2G4 905 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 PALD1Q9ULE6 856 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 UMODL1Q5DID0 1318 aa8.26□□□□□ -1.09
SPTLC2-206ENST00000557566 CACNA1HO95180 2353 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 PARP14Q460N5 1801 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 MYADML2A6NDP7 307 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 LPXNO60711 386 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 SLC25A27O95847 323 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 PGK2P07205 417 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 PFKMP08237 780 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 ACTN1P12814 892 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 KCNA5P22460 613 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 IL15P40933 162 aaPredicted RBP8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 EXOSC9Q06265 439 aaKnown RBP8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 KCTD2Q14681 263 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 MVPQ14764 893 aaKnown RBP8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 MSL3Q8N5Y2 521 aaKnown RBP8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 PRSS33Q8NF86 280 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 SLC9A7Q96T83 725 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 CABP5Q9NP86 173 aa8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 AATFQ9NY61 560 aaKnown RBP eCLIP8.25□□□□□ -1.09
SPTLC2-206ENST00000557566 ABCB5Q2M3G0 1257 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 ZNF792Q3KQV3 632 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 CERKLQ49MI3 558 aaPredicted RBP8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 GNASQ5JWF2 1037 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 TATDN1Q6P1N9 297 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 TBC1D9Q6ZT07 1266 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 SPATA5Q8NB90 893 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 PHOSPHO2Q8TCD6 241 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 ANKS1AQ92625 1134 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 SEZ6LQ9BYH1 1024 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 UPF3BQ9BZI7 483 aaKnown RBP8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 WNT8AQ9H1J5 351 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 LRP2BPQ9P2M1 347 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 SAP30BPQ9UHR5 308 aaKnown RBP8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 ZHX1Q9UKY1 873 aaPredicted RBP8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 FAM50BQ9Y247 325 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 MCM3APO60318 1980 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 RIF1Q5UIP0 2472 aaKnown RBP8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 SCN5AQ14524 2016 aa8.24□□□□□ -1.09
SPTLC2-206ENST00000557566 VPS13AQ96RL7 3174 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 TECTAO75443 2155 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 FLOT1O75955 427 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 CD2BP2O95400 341 aaKnown RBP8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 GJA9P57773 515 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 TIMM10P62072 90 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 KCNH2Q12809 1159 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 TTLL4Q14679 1199 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 PKN1Q16512 942 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 LINC01559Q495D7 138 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 NAA16Q6N069 864 aaPredicted RBP8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 LIAT1Q6ZQX7 453 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 XAGE2Q96GT9 111 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 USP44Q9H0E7 712 aa8.23□□□□□ -1.09
SPTLC2-206ENST00000557566 UPF3AQ9H1J1 476 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms