RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 PABPC5Q96DU9 382 aaKnown RBP12.45□□□□□ -0.42
TRAV33-201ENST00000557514 MRPL38Q96DV4 380 aaKnown RBP12.45□□□□□ -0.42
TRAV33-201ENST00000557514 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 UPF3BQ9BZI7 483 aaKnown RBP12.45□□□□□ -0.42
TRAV33-201ENST00000557514 MUTYHQ9UIF7 546 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 FEM1BQ9UK73 627 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 TNNQ9UQP3 1299 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 VPS13AQ96RL7 3174 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
TRAV33-201ENST00000557514 TECTAO75443 2155 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 TANC1Q9C0D5 1861 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 ANP32CO43423 234 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 GFRA3O60609 400 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 BCAR3O75815 825 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 CXCL10P02778 98 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 RASA1P20936 1047 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 ATP8B2P98198 1209 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 PTPN11Q06124 597 aaPredicted RBP12.44□□□□□ -0.42
TRAV33-201ENST00000557514 IER5LQ5T953 404 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 BMP8AQ7Z5Y6 402 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 AACSQ86V21 672 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 CAGE1Q8TC20 777 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 CTAGE1Q96RT6 745 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 PRRX2Q99811 253 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 SYNPO2Q9UMS6 1093 aa12.44□□□□□ -0.42
TRAV33-201ENST00000557514 MCM3APO60318 1980 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 IGKV6D-41A0A0C4DH26 115 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 GOLIM4O00461 696 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 MYL3P08590 195 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 FDX1P10109 184 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 RBL2Q08999 1139 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 TKFCQ3LXA3 575 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 CNKSR3Q6P9H4 555 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 CTR9Q6PD62 1173 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 KIAA1211Q6ZU35 1233 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 RPAP2Q8IXW5 612 aaPredicted RBP12.43□□□□□ -0.42
TRAV33-201ENST00000557514 FBXO22Q8NEZ5 403 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 C17orf80Q9BSJ5 609 aa12.43□□□□□ -0.42
TRAV33-201ENST00000557514 ALG13Q9NP73 1137 aaKnown RBP12.43□□□□□ -0.42
TRAV33-201ENST00000557514 RIF1Q5UIP0 2472 aaKnown RBP12.43□□□□□ -0.42
TRAV33-201ENST00000557514 GREB1LQ9C091 1923 aaPredicted RBP12.43□□□□□ -0.42
TRAV33-201ENST00000557514 ABHD14A-ACY1A0A1B0GW23 586 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 ADD2P35612 726 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 PKN1Q16512 942 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 PTPROQ16827 1216 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 TCTN1Q2MV58 587 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 SLFNL1Q499Z3 407 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 LRRC8DQ7L1W4 858 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 CCDC155Q8N6L0 562 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 GMCL1P1Q8NEA9 526 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 PPP1R13LQ8WUF5 828 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 POP1Q99575 1024 aaKnown RBP12.42□□□□□ -0.42
TRAV33-201ENST00000557514 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
TRAV33-201ENST00000557514 CYP39A1Q9NYL5 469 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 ARPP21Q9UBL0 812 aaPredicted RBP12.42□□□□□ -0.42
TRAV33-201ENST00000557514 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 NOD1Q9Y239 953 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 GVINP1Q7Z2Y8 2422 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 SCN5AQ14524 2016 aa12.42□□□□□ -0.42
TRAV33-201ENST00000557514 SCN10AQ9Y5Y9 1956 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 RBM47A0AV96 593 aaKnown RBP12.41□□□□□ -0.42
TRAV33-201ENST00000557514 NBNO60934 754 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 EFCAB14O75071 495 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 PARNO95453 639 aaKnown RBP12.41□□□□□ -0.42
TRAV33-201ENST00000557514 SELPP16109 830 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 SMAD2Q15796 467 aaKnown RBP12.41□□□□□ -0.42
TRAV33-201ENST00000557514 TCEAL5Q5H9L2 206 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 LRRC47Q8N1G4 583 aaKnown RBP12.41□□□□□ -0.42
TRAV33-201ENST00000557514 BANK1Q8NDB2 785 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 OR6J1Q8NGC5 347 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
TRAV33-201ENST00000557514 DHX38Q92620 1227 aaKnown RBP12.41□□□□□ -0.42
TRAV33-201ENST00000557514 EDAQ92838 391 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 MKL1Q969V6 931 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 TRERF1Q96PN7 1200 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
TRAV33-201ENST00000557514 WDR11Q9BZH6 1224 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 C1orf115Q9H7X2 142 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 TET1Q8NFU7 2136 aa12.41□□□□□ -0.42
TRAV33-201ENST00000557514 RAD50Q92878 1312 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 EPG5Q9HCE0 2579 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 A6NJR5 290 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 IPO8O15397 1037 aaKnown RBP12.4□□□□□ -0.42
TRAV33-201ENST00000557514 KPNA6O60684 536 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 STAT2P52630 851 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 HTRA4P83105 476 aaPredicted RBP12.4□□□□□ -0.42
TRAV33-201ENST00000557514 MKRN4PQ13434 485 aaPredicted RBP12.4□□□□□ -0.42
TRAV33-201ENST00000557514 PTGISQ16647 500 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 BRDTQ58F21 947 aaPredicted RBP12.4□□□□□ -0.42
TRAV33-201ENST00000557514 MUM1L1Q5H9M0 696 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 SESTD1Q86VW0 696 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
TRAV33-201ENST00000557514 CRBNQ96SW2 442 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 NSUN3Q9H649 340 aaKnown RBP12.4□□□□□ -0.42
TRAV33-201ENST00000557514 CLIP2Q9UDT6 1046 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 INSL6Q9Y581 213 aa12.4□□□□□ -0.42
TRAV33-201ENST00000557514 LOC102724159A0A0B4J2E5 919 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 TMEM221A6NGB7 291 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms