RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 CDH23Q9H251 3354 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 SOWAHBA6NEL2 793 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 ZBTB5O15062 677 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 SNAI1O95863 264 aaPredicted RBP18.42■□□□□ 0.54
TUBB3-214ENST00000557490 CALML3P27482 149 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 PSMA5P28066 241 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 FGD1P98174 961 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 TRAF1Q13077 416 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 ARMCX2Q7L311 632 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 SGMS1Q86VZ5 419 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 HOMER1Q86YM7 354 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 MTMR8Q96EF0 704 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 TCEANC2Q96MN5 208 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 FAM161BQ96MY7 647 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 RIOX1Q9H6W3 641 aa18.42■□□□□ 0.54
TUBB3-214ENST00000557490 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
TUBB3-214ENST00000557490 ZNF865P0CJ78 1059 aaPredicted RBP18.41■□□□□ 0.54
TUBB3-214ENST00000557490 AKR1A1P14550 325 aa18.41■□□□□ 0.54
TUBB3-214ENST00000557490 ANO1Q5XXA6 986 aa18.41■□□□□ 0.54
TUBB3-214ENST00000557490 BLOC1S2Q6QNY1 142 aa18.41■□□□□ 0.54
TUBB3-214ENST00000557490 MCF2L2Q86YR7 1114 aa18.41■□□□□ 0.54
TUBB3-214ENST00000557490 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
TUBB3-214ENST00000557490 USP26Q9BXU7 913 aa18.41■□□□□ 0.54
TUBB3-214ENST00000557490 MAF1Q9H063 256 aa18.41■□□□□ 0.54
TUBB3-214ENST00000557490 ABHD16BQ9H3Z7 469 aa18.41■□□□□ 0.54
TUBB3-214ENST00000557490 EIF5BO60841 1220 aaKnown RBP18.4■□□□□ 0.54
TUBB3-214ENST00000557490 RARBP10826 455 aa18.4■□□□□ 0.54
TUBB3-214ENST00000557490 RPS6P62753 249 aaKnown RBP18.4■□□□□ 0.54
TUBB3-214ENST00000557490 ACVR2BQ13705 512 aa18.4■□□□□ 0.54
TUBB3-214ENST00000557490 SLC30A10Q6XR72 485 aa18.4■□□□□ 0.54
TUBB3-214ENST00000557490 ARRDC4Q8NCT1 418 aa18.4■□□□□ 0.54
TUBB3-214ENST00000557490 PIGSQ96S52 555 aa18.4■□□□□ 0.54
TUBB3-214ENST00000557490 FAM184BQ9ULE4 1060 aa18.4■□□□□ 0.54
TUBB3-214ENST00000557490 PNMA6FA0A0J9YX94 578 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 CYTH3O43739 400 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 RXRAP19793 462 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 SMARCA1P28370 1054 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 SLC35G1Q2M3R5 365 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 MICU3Q86XE3 530 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 RAB11FIP4Q86YS3 637 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 FANCBQ8NB91 859 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 RRP36Q96EU6 259 aaKnown RBP18.39■□□□□ 0.53
TUBB3-214ENST00000557490 PURBQ96QR8 312 aaKnown RBP18.39■□□□□ 0.53
TUBB3-214ENST00000557490 MPHOSPH6Q99547 160 aaKnown RBP18.39■□□□□ 0.53
TUBB3-214ENST00000557490 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 C11orf49Q9H6J7 331 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 RAPGEFL1Q9UHV5 662 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 PCDHA1Q9Y5I3 950 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 PLXNA1Q9UIW2 1896 aa18.39■□□□□ 0.53
TUBB3-214ENST00000557490 LOC102724159A0A0B4J2E5 919 aa18.38■□□□□ 0.53
TUBB3-214ENST00000557490 CPA1P15085 419 aa18.38■□□□□ 0.53
TUBB3-214ENST00000557490 ALDH5A1P51649 535 aaPredicted RBP18.38■□□□□ 0.53
TUBB3-214ENST00000557490 PWP2Q15269 919 aaKnown RBP18.38■□□□□ 0.53
TUBB3-214ENST00000557490 APOA5Q6Q788 366 aa18.38■□□□□ 0.53
TUBB3-214ENST00000557490 PIBF1Q8WXW3 757 aa18.38■□□□□ 0.53
TUBB3-214ENST00000557490 B4DLN1 442 aa18.37■□□□□ 0.53
TUBB3-214ENST00000557490 DNM1LO00429 736 aa18.37■□□□□ 0.53
TUBB3-214ENST00000557490 ZBTB43O43298 467 aa18.37■□□□□ 0.53
TUBB3-214ENST00000557490 PPP1R11O60927 126 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-214ENST00000557490 PLEKHA8P1O95397 391 aa18.37■□□□□ 0.53
TUBB3-214ENST00000557490 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-214ENST00000557490 CASTP20810 708 aaKnown RBP18.37■□□□□ 0.53
TUBB3-214ENST00000557490 RPS6KB1P23443 525 aa18.37■□□□□ 0.53
TUBB3-214ENST00000557490 MRPL12P52815 198 aaKnown RBP18.37■□□□□ 0.53
TUBB3-214ENST00000557490 Q6ZUG5 572 aa18.37■□□□□ 0.53
TUBB3-214ENST00000557490 DNERQ8NFT8 737 aa18.37■□□□□ 0.53
TUBB3-214ENST00000557490 MAFAQ8NHW3 353 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-214ENST00000557490 XPNPEP3Q9NQH7 507 aa18.37■□□□□ 0.53
TUBB3-214ENST00000557490 RBM28Q9NW13 759 aaKnown RBP18.37■□□□□ 0.53
TUBB3-214ENST00000557490 SEC63Q9UGP8 760 aaKnown RBP18.37■□□□□ 0.53
TUBB3-214ENST00000557490 NAP1L2Q9ULW6 460 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-214ENST00000557490 ASTN1O14525 1302 aa18.37■□□□□ 0.53
TUBB3-214ENST00000557490 KLF18A0A0U1RQI7 1052 aa18.36■□□□□ 0.53
TUBB3-214ENST00000557490 KBTBD13C9JR72 458 aa18.36■□□□□ 0.53
TUBB3-214ENST00000557490 NCOR1O75376 2440 aa18.36■□□□□ 0.53
TUBB3-214ENST00000557490 RTN1Q16799 776 aa18.36■□□□□ 0.53
TUBB3-214ENST00000557490 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
TUBB3-214ENST00000557490 GJC2Q5T442 439 aaPredicted RBP18.36■□□□□ 0.53
TUBB3-214ENST00000557490 TMTC3Q6ZXV5 915 aa18.36■□□□□ 0.53
TUBB3-214ENST00000557490 SRBD1Q8N5C6 995 aaKnown RBP18.36■□□□□ 0.53
TUBB3-214ENST00000557490 SYTL5Q8TDW5 730 aaPredicted RBP18.36■□□□□ 0.53
TUBB3-214ENST00000557490 MORC4Q8TE76 937 aa18.36■□□□□ 0.53
TUBB3-214ENST00000557490 KATNBL1Q9H079 304 aa18.36■□□□□ 0.53
TUBB3-214ENST00000557490 BRPF3Q9ULD4 1205 aa18.36■□□□□ 0.53
TUBB3-214ENST00000557490 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 GOLGA8BA8MQT2 603 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 CFBP00751 764 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 PDE4DQ08499 809 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 ZNF697Q5TEC3 545 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 RNF180Q86T96 592 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 CMTR1Q8N1G2 835 aaKnown RBP18.35■□□□□ 0.53
TUBB3-214ENST00000557490 SAMD3Q8N6K7 520 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 TBC1D5Q92609 795 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
TUBB3-214ENST00000557490 DDX49Q9Y6V7 483 aaKnown RBP18.35■□□□□ 0.53
TUBB3-214ENST00000557490 SMCHD1A6NHR9 2005 aa18.34■□□□□ 0.53
TUBB3-214ENST00000557490 DUSP11O75319 330 aaKnown RBP18.34■□□□□ 0.53
TUBB3-214ENST00000557490 PGK1P00558 417 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms