RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 TMEM63BQ5T3F8 832 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 SIAH1Q8IUQ4 282 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 MIGA1Q8NAN2 632 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 SNRKQ9NRH2 765 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 AKAP2Q9Y2D5 859 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 TMX2Q9Y320 296 aa11.47□□□□□ -0.57
NEDD1-211ENST00000557454 H3BNC9 293 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 NCK2O43639 380 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 GABPAQ06546 454 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 HYAL1Q12794 435 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 BFSP2Q13515 415 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 CNKSR3Q6P9H4 555 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 TMEM179Q6ZVK1 233 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 ANKRD35Q8N283 1001 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 SH2D4AQ9H788 454 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 ARHGEF10LQ9HCE6 1279 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 CD207Q9UJ71 328 aa11.46□□□□□ -0.57
NEDD1-211ENST00000557454 DDX49Q9Y6V7 483 aaKnown RBP11.46□□□□□ -0.57
NEDD1-211ENST00000557454 MYH1P12882 1939 aa11.46□□□□□ -0.58
NEDD1-211ENST00000557454 FAM208BQ5VWN6 2430 aa11.46□□□□□ -0.58
NEDD1-211ENST00000557454 GTF2F1P35269 517 aaKnown RBP eCLIP11.45□□□□□ -0.58
NEDD1-211ENST00000557454 CNTN2Q02246 1040 aa11.45□□□□□ -0.58
NEDD1-211ENST00000557454 CBX2Q14781 532 aaPredicted RBP11.45□□□□□ -0.58
NEDD1-211ENST00000557454 LRRFIP1Q32MZ4 808 aaKnown RBP11.45□□□□□ -0.58
NEDD1-211ENST00000557454 KIAA2013Q8IYS2 634 aa11.45□□□□□ -0.58
NEDD1-211ENST00000557454 TMEM105Q8N8V8 129 aa11.45□□□□□ -0.58
NEDD1-211ENST00000557454 COPRSQ9NQ92 184 aa11.45□□□□□ -0.58
NEDD1-211ENST00000557454 PDGFCQ9NRA1 345 aa11.45□□□□□ -0.58
NEDD1-211ENST00000557454 INSL6Q9Y581 213 aa11.45□□□□□ -0.58
NEDD1-211ENST00000557454 FRYLO94915 3013 aa11.44□□□□□ -0.58
NEDD1-211ENST00000557454 LINC01565O15544 149 aa11.44□□□□□ -0.58
NEDD1-211ENST00000557454 MYL3P08590 195 aa11.44□□□□□ -0.58
NEDD1-211ENST00000557454 CYP7A1P22680 504 aa11.44□□□□□ -0.58
NEDD1-211ENST00000557454 PURAQ00577 322 aaKnown RBP11.44□□□□□ -0.58
NEDD1-211ENST00000557454 FAM83BQ5T0W9 1011 aa11.44□□□□□ -0.58
NEDD1-211ENST00000557454 FBXO16Q8IX29 292 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-211ENST00000557454 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-211ENST00000557454 RIPOR3Q96MK2 946 aa11.44□□□□□ -0.58
NEDD1-211ENST00000557454 NOD1Q9Y239 953 aa11.44□□□□□ -0.58
NEDD1-211ENST00000557454 ABHD14A-ACY1A0A1B0GW23 586 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 RAD21O60216 631 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 NBNO60934 754 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 CSPG5O95196 566 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 CYP2E1P05181 493 aaPredicted RBP11.43□□□□□ -0.58
NEDD1-211ENST00000557454 POLR3DP05423 398 aaPredicted RBP11.43□□□□□ -0.58
NEDD1-211ENST00000557454 UQCRFS1P1P0C7P4 283 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 AKR1B1P15121 316 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 ACAP1Q15027 740 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.43□□□□□ -0.58
NEDD1-211ENST00000557454 EEPD1Q7L9B9 569 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 FBXO11Q86XK2 927 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 CPXCR1Q8N123 301 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 FAM133AQ8N9E0 248 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 AFAP1L1Q8TED9 768 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 SAMD11Q96NU1 681 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 IGFLR1Q9H665 355 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 PIH1D3Q9NQM4 214 aaKnown RBP11.43□□□□□ -0.58
NEDD1-211ENST00000557454 POLR3EQ9NVU0 708 aa11.43□□□□□ -0.58
NEDD1-211ENST00000557454 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
NEDD1-211ENST00000557454 CXCL10P02778 98 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 UBTFL1P0CB47 393 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-211ENST00000557454 ICAM3P32942 547 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 HTRA4P83105 476 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-211ENST00000557454 PTPN21Q16825 1174 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.42□□□□□ -0.582e-6■■■■□ 20.9
NEDD1-211ENST00000557454 LRRC8DQ7L1W4 858 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 TMEM192Q8IY95 271 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 MSLNLQ96KJ4 702 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 RPGRIP1Q96KN7 1286 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 SLF1Q9BQI6 1058 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 MTG1Q9BT17 334 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-211ENST00000557454 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 DLL3Q9NYJ7 618 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 Q9Y3F1 56 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 GPR179Q6PRD1 2367 aa11.42□□□□□ -0.58
NEDD1-211ENST00000557454 EFCAB14O75071 495 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 EYA4O95677 639 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 SELPP16109 830 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 NDUFV1P49821 464 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
NEDD1-211ENST00000557454 IKBKEQ14164 716 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 TAPT1Q6NXT6 567 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 NFRKBQ6P4R8 1299 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 MYOCDQ8IZQ8 938 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 CCDC155Q8N6L0 562 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 SMRP1Q8NCR6 262 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
NEDD1-211ENST00000557454 NUP88Q99567 741 aaPredicted RBP11.41□□□□□ -0.58
NEDD1-211ENST00000557454 RAVER2Q9HCJ3 691 aaKnown RBP11.41□□□□□ -0.58
NEDD1-211ENST00000557454 ASB14A6NK59 587 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 E9PSI1 815 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 EEF2P13639 858 aaKnown RBP11.4□□□□□ -0.58
NEDD1-211ENST00000557454 PTGISQ16647 500 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 IQSEC1Q6DN90 963 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 KCNG4Q8TDN1 519 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 DHX38Q92620 1227 aaKnown RBP11.4□□□□□ -0.58
NEDD1-211ENST00000557454 DYNLL2Q96FJ2 89 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 CTAGE1Q96RT6 745 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 PHF7Q9BWX1 381 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms