RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TM6SF1Q9BZW5 370 aa14.47□□□□□ -0.09
SLIRP-209ENST00000557342 MAP3K20Q9NYL2 800 aaKnown RBP14.47□□□□□ -0.09
SLIRP-209ENST00000557342 SEC63Q9UGP8 760 aaKnown RBP14.47□□□□□ -0.09
SLIRP-209ENST00000557342 ZHX1Q9UKY1 873 aaPredicted RBP14.47□□□□□ -0.09
SLIRP-209ENST00000557342 FAM184BQ9ULE4 1060 aa14.47□□□□□ -0.09
SLIRP-209ENST00000557342 PCDHA1Q9Y5I3 950 aa14.47□□□□□ -0.09
SLIRP-209ENST00000557342 BRCA2P51587 3418 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 KLF18A0A0U1RQI7 1052 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 CPA1P15085 419 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 PPP2R5BQ15173 497 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 SLC35G1Q2M3R5 365 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 RUFY3Q7L099 469 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 SRBD1Q8N5C6 995 aaKnown RBP14.46□□□□□ -0.09
SLIRP-209ENST00000557342 MORC4Q8TE76 937 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 PAWRQ96IZ0 340 aaKnown RBP14.46□□□□□ -0.09
SLIRP-209ENST00000557342 ZSWIM6Q9HCJ5 1215 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 BRPF3Q9ULD4 1205 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 CYP46A1Q9Y6A2 500 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 KIAA1217Q5T5P2 1943 aa14.46□□□□□ -0.09
SLIRP-209ENST00000557342 CCDC196A0A1B0GTZ2 297 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 GOLGA8AA7E2F4 631 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 GOLGA8BA8MQT2 603 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 DNM1LO00429 736 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 PPP1R11O60927 126 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-209ENST00000557342 PLEKHA8P1O95397 391 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 ANAPC15P60006 121 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 RTN1Q16799 776 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 TMTC3Q6ZXV5 915 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 RAB11FIP4Q86YS3 637 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 BRF1Q92994 677 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 AGXT2Q9BYV1 514 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 C11orf49Q9H6J7 331 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 NAP1L2Q9ULW6 460 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-209ENST00000557342 ALPK3Q96L96 1907 aa14.45□□□□□ -0.1
SLIRP-209ENST00000557342 ASTN1O14525 1302 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 CFBP00751 764 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 HSD17B4P51659 736 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 GHRHRQ02643 423 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 APOBRQ0VD83 1088 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 CCDC144BQ3MJ40 725 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 ANO1Q5XXA6 986 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 SYTL5Q8TDW5 730 aaPredicted RBP14.44□□□□□ -0.1
SLIRP-209ENST00000557342 NSUN6Q8TEA1 469 aaKnown RBP14.44□□□□□ -0.1
SLIRP-209ENST00000557342 DIS3LQ8TF46 1054 aaKnown RBP14.44□□□□□ -0.1
SLIRP-209ENST00000557342 PIBF1Q8WXW3 757 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 PURBQ96QR8 312 aaKnown RBP14.44□□□□□ -0.1
SLIRP-209ENST00000557342 KATNBL1Q9H079 304 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 VTA1Q9NP79 307 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 XPNPEP3Q9NQH7 507 aa14.44□□□□□ -0.1
SLIRP-209ENST00000557342 KBTBD13C9JR72 458 aa14.43□□□□□ -0.1
SLIRP-209ENST00000557342 GCOM1H8Y6P7 765 aaPredicted RBP14.43□□□□□ -0.1
SLIRP-209ENST00000557342 DUSP11O75319 330 aaKnown RBP14.43□□□□□ -0.1
SLIRP-209ENST00000557342 POLR2MP0CAP2 368 aa14.43□□□□□ -0.1
SLIRP-209ENST00000557342 MNX1P50219 401 aaPredicted RBP14.43□□□□□ -0.1
SLIRP-209ENST00000557342 METAP2P50579 478 aaKnown RBP eCLIP14.43□□□□□ -0.17e-8■□□□□ 9.9
SLIRP-209ENST00000557342 PDE4DQ08499 809 aa14.43□□□□□ -0.1
SLIRP-209ENST00000557342 IQSEC1Q6DN90 963 aa14.43□□□□□ -0.1
SLIRP-209ENST00000557342 RNF180Q86T96 592 aa14.43□□□□□ -0.1
SLIRP-209ENST00000557342 CMTR1Q8N1G2 835 aaKnown RBP14.43□□□□□ -0.1
SLIRP-209ENST00000557342 TBC1D5Q92609 795 aa14.43□□□□□ -0.1
SLIRP-209ENST00000557342 IWS1Q96ST2 819 aa14.43□□□□□ -0.1
SLIRP-209ENST00000557342 SPC25Q9HBM1 224 aa14.43□□□□□ -0.1
SLIRP-209ENST00000557342 OPLAHO14841 1288 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 COL6A1P12109 1028 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 EDNRBP24530 442 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 LRRC41Q15345 812 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 GJC2Q5T442 439 aaPredicted RBP14.42□□□□□ -0.1
SLIRP-209ENST00000557342 ARHGEF16Q5VV41 709 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 CCDC82Q8N4S0 544 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 DPF3Q92784 378 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 TAAR1Q96RJ0 339 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 RMDN3Q96TC7 470 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 NID2Q14112 1375 aa14.42□□□□□ -0.1
SLIRP-209ENST00000557342 CNTNAP5Q8WYK1 1306 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 SLC34A2O95436 690 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
SLIRP-209ENST00000557342 EVCP57679 992 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 TNFAIP2Q03169 654 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 TAPT1Q6NXT6 567 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 NOL8Q76FK4 1167 aaKnown RBP14.41□□□□□ -0.1
SLIRP-209ENST00000557342 EEPD1Q7L9B9 569 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 FBXO16Q8IX29 292 aaPredicted RBP14.41□□□□□ -0.1
SLIRP-209ENST00000557342 CUL5Q93034 780 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 UPF3BQ9BZI7 483 aaKnown RBP14.41□□□□□ -0.1
SLIRP-209ENST00000557342 PDRG1Q9NUG6 133 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 COL20A1Q9P218 1284 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 SYNRGQ9UMZ2 1314 aa14.41□□□□□ -0.1
SLIRP-209ENST00000557342 hCG_1984214I3L0E3 225 aa14.4□□□□□ -0.1
SLIRP-209ENST00000557342 ADAMTS4O75173 837 aa14.4□□□□□ -0.1
SLIRP-209ENST00000557342 PGK1P00558 417 aa14.4□□□□□ -0.1
SLIRP-209ENST00000557342 CDC27P30260 824 aa14.4□□□□□ -0.1
SLIRP-209ENST00000557342 ADCYAP1R1P41586 468 aa14.4□□□□□ -0.1
SLIRP-209ENST00000557342 STXBP2Q15833 593 aa14.4□□□□□ -0.1
SLIRP-209ENST00000557342 ZNF713Q8N859 430 aaPredicted RBP14.4□□□□□ -0.1
SLIRP-209ENST00000557342 IL17RAQ96F46 866 aa14.4□□□□□ -0.1
SLIRP-209ENST00000557342 TSEN34Q9BSV6 310 aaKnown RBP14.4□□□□□ -0.1
SLIRP-209ENST00000557342 SENP6Q9GZR1 1112 aaPredicted RBP14.4□□□□□ -0.1
SLIRP-209ENST00000557342 UPF3AQ9H1J1 476 aaKnown RBP14.4□□□□□ -0.1
SLIRP-209ENST00000557342 PXMP2Q9NR77 195 aa14.4□□□□□ -0.1
SLIRP-209ENST00000557342 FAM217BQ9NTX9 383 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms