RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 CREB3L3Q68CJ9 461 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 CASC1Q6TDU7 716 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 CATIPQ7Z7H3 387 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 NUP133Q8WUM0 1156 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 TBC1D5Q92609 795 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 MYL10Q9BUA6 226 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 STARD7Q9NQZ5 370 aa19.27■□□□□ 0.68
VSX1-207ENST00000557285 PALM3A6NDB9 673 aaPredicted RBP19.26■□□□□ 0.67
VSX1-207ENST00000557285 DYNC1LI2O43237 492 aaPredicted RBP19.26■□□□□ 0.67
VSX1-207ENST00000557285 ASGR1P07306 291 aa19.26■□□□□ 0.67
VSX1-207ENST00000557285 GJA9P57773 515 aa19.26■□□□□ 0.67
VSX1-207ENST00000557285 TLE2Q04725 743 aa19.26■□□□□ 0.67
VSX1-207ENST00000557285 COL9A3Q14050 684 aaPredicted RBP19.26■□□□□ 0.67
VSX1-207ENST00000557285 GRM4Q14833 912 aa19.26■□□□□ 0.67
VSX1-207ENST00000557285 SNX17Q15036 470 aa19.26■□□□□ 0.67
VSX1-207ENST00000557285 TAPT1Q6NXT6 567 aa19.26■□□□□ 0.67
VSX1-207ENST00000557285 NFXL1Q6ZNB6 911 aa19.26■□□□□ 0.67
VSX1-207ENST00000557285 TSEN34Q9BSV6 310 aaKnown RBP19.26■□□□□ 0.67
VSX1-207ENST00000557285 AP5M1Q9H0R1 490 aa19.26■□□□□ 0.67
VSX1-207ENST00000557285 UPF3AQ9H1J1 476 aaKnown RBP19.26■□□□□ 0.67
VSX1-207ENST00000557285 VTA1Q9NP79 307 aa19.26■□□□□ 0.67
VSX1-207ENST00000557285 MOXD2PA6NHM9 499 aa19.25■□□□□ 0.67
VSX1-207ENST00000557285 CDC45O75419 566 aa19.25■□□□□ 0.67
VSX1-207ENST00000557285 SH3RF1Q7Z6J0 888 aa19.25■□□□□ 0.67
VSX1-207ENST00000557285 PCSK9Q8NBP7 692 aaKnown RBP19.25■□□□□ 0.67
VSX1-207ENST00000557285 IGDCC4Q8TDY8 1250 aa19.25■□□□□ 0.67
VSX1-207ENST00000557285 GLT1D1Q96MS3 346 aa19.25■□□□□ 0.67
VSX1-207ENST00000557285 LRRC2Q9BYS8 371 aa19.25■□□□□ 0.67
VSX1-207ENST00000557285 MRPL11Q9Y3B7 192 aaKnown RBP19.25■□□□□ 0.67
VSX1-207ENST00000557285 LAMA3Q16787 3333 aa19.25■□□□□ 0.67
VSX1-207ENST00000557285 LTBP2Q14767 1821 aa19.24■□□□□ 0.67
VSX1-207ENST00000557285 CFBP00751 764 aa19.24■□□□□ 0.67
VSX1-207ENST00000557285 CST5P28325 142 aaPredicted RBP19.24■□□□□ 0.67
VSX1-207ENST00000557285 MCM5P33992 734 aa19.24■□□□□ 0.67
VSX1-207ENST00000557285 IQSEC1Q6DN90 963 aa19.24■□□□□ 0.67
VSX1-207ENST00000557285 CCSAPQ6IQ19 270 aaPredicted RBP19.24■□□□□ 0.67
VSX1-207ENST00000557285 RAB11FIP4Q86YS3 637 aa19.24■□□□□ 0.67
VSX1-207ENST00000557285 MPHOSPH6Q99547 160 aaKnown RBP19.24■□□□□ 0.67
VSX1-207ENST00000557285 AMNQ9BXJ7 453 aa19.24■□□□□ 0.67
VSX1-207ENST00000557285 WDR11Q9BZH6 1224 aa19.24■□□□□ 0.67
VSX1-207ENST00000557285 LY9Q9HBG7 655 aa19.24■□□□□ 0.67
VSX1-207ENST00000557285 PDLIM7Q9NR12 457 aa19.24■□□□□ 0.67
VSX1-207ENST00000557285 GNEQ9Y223 722 aaKnown RBP19.24■□□□□ 0.67
VSX1-207ENST00000557285 SZT2Q5T011 3432 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 CTAGE5O15320 804 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 PPP1R11O60927 126 aaPredicted RBP19.23■□□□□ 0.67
VSX1-207ENST00000557285 BMP8BP34820 402 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 TROAPQ12815 778 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 NECTIN1Q15223 517 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 FSCN1Q16658 493 aaKnown RBP19.23■□□□□ 0.67
VSX1-207ENST00000557285 SLC35G1Q2M3R5 365 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 MCF2L2Q86YR7 1114 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 ZNF654Q8IZM8 581 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 SYTL5Q8TDW5 730 aaPredicted RBP19.23■□□□□ 0.67
VSX1-207ENST00000557285 MORC4Q8TE76 937 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 TAAR1Q96RJ0 339 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 PIGSQ96S52 555 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 COL20A1Q9P218 1284 aa19.23■□□□□ 0.67
VSX1-207ENST00000557285 TRIM43BA6NCK2 446 aa19.22■□□□□ 0.67
VSX1-207ENST00000557285 ZBTB5O15062 677 aa19.22■□□□□ 0.67
VSX1-207ENST00000557285 CLTBP09497 229 aa19.22■□□□□ 0.67
VSX1-207ENST00000557285 RXRAP19793 462 aa19.22■□□□□ 0.67
VSX1-207ENST00000557285 DNERQ8NFT8 737 aa19.22■□□□□ 0.67
VSX1-207ENST00000557285 TRIM43Q96BQ3 446 aaPredicted RBP19.22■□□□□ 0.67
VSX1-207ENST00000557285 PCDHA1Q9Y5I3 950 aa19.22■□□□□ 0.67
VSX1-207ENST00000557285 A0A1W2PPC1 479 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 CCDC69A6NI79 296 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 SOX1O00570 391 aaPredicted RBP19.21■□□□□ 0.67
VSX1-207ENST00000557285 SH2B2O14492 632 aaPredicted RBP19.21■□□□□ 0.67
VSX1-207ENST00000557285 CYTH3O43739 400 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 EIF2AK2P19525 551 aaKnown RBP19.21■□□□□ 0.67
VSX1-207ENST00000557285 RNF20Q5VTR2 975 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 C1orf53Q5VUE5 145 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 TDHQ8IZJ6 230 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 RGS22Q8NE09 1264 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 OR6J1Q8NGC5 347 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 CTCFLQ8NI51 663 aaPredicted RBP19.21■□□□□ 0.67
VSX1-207ENST00000557285 BADQ92934 168 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 LRCH3Q96II8 777 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 RMDN3Q96TC7 470 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 TMEM39AQ9NV64 488 aa19.21■□□□□ 0.67
VSX1-207ENST00000557285 DCDC2CA8MYV0 355 aa19.2■□□□□ 0.66
VSX1-207ENST00000557285 B4DLN1 442 aa19.2■□□□□ 0.66
VSX1-207ENST00000557285 HOXA13P31271 388 aaPredicted RBP19.2■□□□□ 0.66
VSX1-207ENST00000557285 MRPL12P52815 198 aaKnown RBP19.2■□□□□ 0.66
VSX1-207ENST00000557285 PPP2R5BQ15173 497 aa19.2■□□□□ 0.66
VSX1-207ENST00000557285 DUSP28Q4G0W2 176 aa19.2■□□□□ 0.66
VSX1-207ENST00000557285 ARHGEF16Q5VV41 709 aa19.2■□□□□ 0.66
VSX1-207ENST00000557285 NSUN6Q8TEA1 469 aaKnown RBP19.2■□□□□ 0.66
VSX1-207ENST00000557285 COPS5Q92905 334 aa19.2■□□□□ 0.66
VSX1-207ENST00000557285 MTMR8Q96EF0 704 aa19.2■□□□□ 0.66
VSX1-207ENST00000557285 TMEM87BQ96K49 555 aa19.2■□□□□ 0.66
VSX1-207ENST00000557285 TCEANC2Q96MN5 208 aa19.2■□□□□ 0.66
VSX1-207ENST00000557285 LOC102724159A0A0B4J2E5 919 aa19.19■□□□□ 0.66
VSX1-207ENST00000557285 A0A0U1RQG5 324 aaPredicted RBP19.19■□□□□ 0.66
VSX1-207ENST00000557285 OPLAHO14841 1288 aa19.19■□□□□ 0.66
VSX1-207ENST00000557285 ZEB2O60315 1214 aa19.19■□□□□ 0.66
VSX1-207ENST00000557285 DDAH1O94760 285 aa19.19■□□□□ 0.66
VSX1-207ENST00000557285 EDNRBP24530 442 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms