RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 ICAM1P05362 532 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 CA3P07451 260 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 PFKMP08237 780 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 MYL3P08590 195 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 PURAQ00577 322 aaKnown RBP14.57□□□□□ -0.08
SNX6-209ENST00000557265 BAATQ14032 418 aaPredicted RBP14.57□□□□□ -0.08
SNX6-209ENST00000557265 AAK1Q2M2I8 961 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 TMEM67Q5HYA8 995 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 C20orf194Q5TEA3 1177 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 WDR11Q9BZH6 1224 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 DCTPP1Q9H773 170 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 CERS4Q9HA82 394 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 POLR3EQ9NVU0 708 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 TNKSO95271 1327 aa14.57□□□□□ -0.08
SNX6-209ENST00000557265 ERC2O15083 957 aa14.56□□□□□ -0.08
SNX6-209ENST00000557265 KCNQ1P51787 676 aa14.56□□□□□ -0.08
SNX6-209ENST00000557265 CTDSPL2Q05D32 466 aa14.56□□□□□ -0.08
SNX6-209ENST00000557265 CCDC96Q2M329 555 aa14.56□□□□□ -0.08
SNX6-209ENST00000557265 GPHNQ9NQX3 736 aaPredicted RBP14.56□□□□□ -0.08
SNX6-209ENST00000557265 ADD3Q9UEY8 706 aaKnown RBP14.56□□□□□ -0.08
SNX6-209ENST00000557265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNX6-209ENST00000557265 MTCH2Q9Y6C9 303 aa14.56□□□□□ -0.08
SNX6-209ENST00000557265 MCM3APO60318 1980 aa14.56□□□□□ -0.08
SNX6-209ENST00000557265 CHD7Q9P2D1 2997 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 GTPBP6O43824 516 aaPredicted RBP14.55□□□□□ -0.08
SNX6-209ENST00000557265 ACTN1P12814 892 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 POU3F3P20264 500 aaPredicted RBP14.55□□□□□ -0.08
SNX6-209ENST00000557265 SLC16A2P36021 539 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 PLA2G5P39877 138 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 CPT1AP50416 773 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 ALDH5A1P51649 535 aaPredicted RBP14.55□□□□□ -0.08
SNX6-209ENST00000557265 FAM47CQ5HY64 1035 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 ZMYM1Q5SVZ6 1142 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 TTBK2Q6IQ55 1244 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 PPP1R13LQ8WUF5 828 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 FAM122AQ96E09 287 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 MTG1Q9BT17 334 aaPredicted RBP14.55□□□□□ -0.08
SNX6-209ENST00000557265 FSD1Q9BTV5 496 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 C1QTNF1Q9BXJ1 281 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 RANBP17Q9H2T7 1088 aaKnown RBP14.55□□□□□ -0.08
SNX6-209ENST00000557265 RCAN3Q9UKA8 241 aa14.55□□□□□ -0.08
SNX6-209ENST00000557265 RBM47A0AV96 593 aaKnown RBP14.54□□□□□ -0.08
SNX6-209ENST00000557265 PTPDC1A2A3K4 754 aa14.54□□□□□ -0.08
SNX6-209ENST00000557265 EPOPA6NHQ4 379 aa14.54□□□□□ -0.08
SNX6-209ENST00000557265 NFIBO00712 420 aa14.54□□□□□ -0.08
SNX6-209ENST00000557265 RANBP6O60518 1105 aaKnown RBP14.54□□□□□ -0.08
SNX6-209ENST00000557265 NBPF20Q3BBV1 942 aa14.54□□□□□ -0.08
SNX6-209ENST00000557265 KRT40Q6A162 431 aa14.54□□□□□ -0.08
SNX6-209ENST00000557265 RETREG2Q8NC44 543 aa14.54□□□□□ -0.08
SNX6-209ENST00000557265 OR6J1Q8NGC5 347 aa14.54□□□□□ -0.08
SNX6-209ENST00000557265 DCAF4Q8WV16 495 aa14.54□□□□□ -0.08
SNX6-209ENST00000557265 ARNTL2Q8WYA1 636 aa14.54□□□□□ -0.08
SNX6-209ENST00000557265 MYH7P12883 1935 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 TTC41PQ6P2S7 1318 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 FOXP2O15409 715 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 IQCF3P0C7M6 154 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 CALML3P27482 149 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 RFC2P35250 354 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 TAP1Q03518 808 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 BRDTQ58F21 947 aaPredicted RBP14.53□□□□□ -0.08
SNX6-209ENST00000557265 SYDE2Q5VT97 1194 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 PHOSPHO2Q8TCD6 241 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 PI4K2BQ8TCG2 481 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 SLC9A7Q96T83 725 aa14.53□□□□□ -0.08
SNX6-209ENST00000557265 FTOQ9C0B1 505 aaKnown RBP eCLIP14.53□□□□□ -0.08
SNX6-209ENST00000557265 FRMPD2Q68DX3 1309 aaPredicted RBP14.52□□□□□ -0.08
SNX6-209ENST00000557265 LOC102724159A0A0B4J2E5 919 aa14.52□□□□□ -0.09
SNX6-209ENST00000557265 ARHGEF15O94989 841 aa14.52□□□□□ -0.09
SNX6-209ENST00000557265 NOVP48745 357 aa14.52□□□□□ -0.09
SNX6-209ENST00000557265 PWP2Q15269 919 aaKnown RBP14.52□□□□□ -0.09
SNX6-209ENST00000557265 NFRKBQ6P4R8 1299 aa14.52□□□□□ -0.09
SNX6-209ENST00000557265 BTNL9Q6UXG8 535 aa14.52□□□□□ -0.09
SNX6-209ENST00000557265 SLC30A10Q6XR72 485 aa14.52□□□□□ -0.09
SNX6-209ENST00000557265 HERC6Q8IVU3 1022 aa14.52□□□□□ -0.09
SNX6-209ENST00000557265 OTUD7AQ8TE49 926 aaPredicted RBP14.52□□□□□ -0.09
SNX6-209ENST00000557265 GPCPD1Q9NPB8 672 aa14.52□□□□□ -0.09
SNX6-209ENST00000557265 COG5Q9UP83 839 aa14.52□□□□□ -0.09
SNX6-209ENST00000557265 MYH4Q9Y623 1939 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 RAD50Q92878 1312 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 A6NJR5 290 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 KIF28PB7ZC32 967 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 KPNA6O60684 536 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 CHMP4BP1P59074 171 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 PDE4DQ08499 809 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 PPP2R5BQ15173 497 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 RNF207Q6ZRF8 634 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 CLEC4DQ8WXI8 215 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 COPS5Q92905 334 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 EPHX3Q9H6B9 360 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 ANAPC4Q9UJX5 808 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 NOD1Q9Y239 953 aa14.51□□□□□ -0.09
SNX6-209ENST00000557265 PRRC2BQ5JSZ5 2229 aaKnown RBP14.51□□□□□ -0.09
SNX6-209ENST00000557265 XIRP2A4UGR9 3374 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 NKRFO15226 690 aaKnown RBP eCLIP14.5□□□□□ -0.09
SNX6-209ENST00000557265 TLL1O43897 1013 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 ORC4O43929 436 aa14.5□□□□□ -0.09
SNX6-209ENST00000557265 TXNP10599 105 aaKnown RBP14.5□□□□□ -0.09
SNX6-209ENST00000557265 TOP1P11387 765 aaKnown RBP14.5□□□□□ -0.09
SNX6-209ENST00000557265 RPS6P62753 249 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms