RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 RXRAP19793 462 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 DHTKD1Q96HY7 919 aaPredicted RBP13.1□□□□□ -0.31
NEK9-210ENST00000557026 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 ABCB11O95342 1321 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 FMNL1O95466 1100 aaPredicted RBP13.1□□□□□ -0.31
NEK9-210ENST00000557026 RPLP2P05387 115 aaKnown RBP13.1□□□□□ -0.31
NEK9-210ENST00000557026 CMA1P23946 247 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 EP400NLQ6ZTU2 488 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 NEDD9Q14511 834 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 THEM5Q8N1Q8 247 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 HOMER3Q9NSC5 361 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
NEK9-210ENST00000557026 ASB14A6NK59 587 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 SLC26A4O43511 780 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 MMP10P09238 476 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 POLA2Q14181 598 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 C10orf76Q5T2E6 689 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 MCPH1Q8NEM0 835 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 RBM46Q8TBY0 533 aaKnown RBP13.09□□□□□ -0.31
NEK9-210ENST00000557026 PLIN2Q99541 437 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 C2orf40Q9H1Z8 148 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 M0R2C6 588 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 MECOMQ03112 1051 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 E2F5Q15329 346 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 B4GALNT4Q76KP1 1039 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 RNF169Q8NCN4 708 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 SEC62Q99442 399 aaKnown RBP13.09□□□□□ -0.31
NEK9-210ENST00000557026 MID2Q9UJV3 735 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 AKT3Q9Y243 479 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 KIF1BO60333 1816 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 A0A1W2PQ27 194 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 A0A1W2PQ64 194 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 A0A1W2PQD8 194 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 HSPD1P10809 573 aaKnown RBP13.09□□□□□ -0.31
NEK9-210ENST00000557026 SCP2P22307 547 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 NSFP46459 744 aaKnown RBP13.09□□□□□ -0.31
NEK9-210ENST00000557026 SCNN1DP51172 638 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 FANCCQ00597 558 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 SRRM1Q8IYB3 904 aaKnown RBP13.09□□□□□ -0.31
NEK9-210ENST00000557026 EFHBQ8N7U6 833 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 ATRIPQ8WXE1 791 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 MMS19Q96T76 1030 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 SUGCTQ9HAC7 445 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 KCNK9Q9NPC2 374 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 TBC1D22BQ9NU19 505 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 ZKSCAN5Q9Y2L8 839 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 URGCPQ8TCY9 931 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 GSDMAQ96QA5 445 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
NEK9-210ENST00000557026 METP08581 1390 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 PSMC2P35998 433 aaKnown RBP13.09□□□□□ -0.31
NEK9-210ENST00000557026 FAM47AQ5JRC9 791 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 TMEM106CQ9BVX2 250 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
NEK9-210ENST00000557026 EBAG9O00559 213 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 OR8K1Q8NGG5 319 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 FAM76AQ8TAV0 307 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 MXD3Q9BW11 206 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 MRPL47Q9HD33 250 aaKnown RBP13.08□□□□□ -0.32
NEK9-210ENST00000557026 PPP6R2O75170 966 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 SFNP31947 248 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 RSRC2Q7L4I2 434 aaKnown RBP13.08□□□□□ -0.32
NEK9-210ENST00000557026 CCDC25Q86WR0 208 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 FAM227BQ96M60 508 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 GREM2Q9H772 168 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 ZHX1Q9UKY1 873 aaPredicted RBP13.08□□□□□ -0.32
NEK9-210ENST00000557026 WDR19Q8NEZ3 1342 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 ARL13BQ3SXY8 428 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 HHATQ5VTY9 493 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 C1orf228Q6PIY5 440 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 POMGNT1Q8WZA1 660 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 OSBPL3Q9H4L5 887 aa13.08□□□□□ -0.32
NEK9-210ENST00000557026 CPSF1Q10570 1443 aaKnown RBP13.07□□□□□ -0.32
NEK9-210ENST00000557026 TET3O43151 1660 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 PNMA6FA0A0J9YX94 578 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 TRIM42Q8IWZ5 723 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
NEK9-210ENST00000557026 TRPV6Q9H1D0 765 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 VPS16Q9H269 839 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 WDR70Q9NW82 654 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 EHD2Q9NZN4 543 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 VPS54Q9P1Q0 977 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 SEPT9Q9UHD8 586 aaPredicted RBP13.07□□□□□ -0.32
NEK9-210ENST00000557026 LIFRP42702 1097 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 UBXN2AP68543 259 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 KRT76Q01546 638 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 STXBP2Q15833 593 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 SP8Q8IXZ3 490 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 ZSWIM6Q9HCJ5 1215 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 KMT5AQ9NQR1 393 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 LMCD1Q9NZU5 365 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms