RNA–Protein interactions for RNA: ENST00000556968.2

SERPINA3-208, Transcript of serpin family A member 3, humanhuman

TSL 1 (best)

Gene SERPINA3, Length 1,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA3-208ENST00000556968 CALML3P27482 149 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 ALDH5A1P51649 535 aaPredicted RBP12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 FAAP100Q0VG06 881 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 SHHQ15465 462 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 FSCN1Q16658 493 aaKnown RBP12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 EEPD1Q7L9B9 569 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 TLK2Q86UE8 772 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 FBXO16Q8IX29 292 aaPredicted RBP12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 RGS22Q8NE09 1264 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 VTI1AQ96AJ9 217 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 MPHOSPH6Q99547 160 aaKnown RBP12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 UBA5Q9GZZ9 404 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
SERPINA3-208ENST00000556968 A0A0U1RQG5 324 aaPredicted RBP12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 ARVCFO00192 962 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 DYNC1LI2O43237 492 aaPredicted RBP12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 CABYRO75952 493 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 PARP1P09874 1014 aaKnown RBP12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 RPS6P62753 249 aaKnown RBP12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 BEX3Q00994 111 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 TRDNQ13061 729 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 POTEHQ6S545 545 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 SLC30A10Q6XR72 485 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 KIAA1211Q6ZU35 1233 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 DNERQ8NFT8 737 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 CPVLQ9H3G5 476 aa12.93□□□□□ -0.34
SERPINA3-208ENST00000556968 ABCB11O95342 1321 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 RBM47A0AV96 593 aaKnown RBP12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 B4DLN1 442 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 ZEB2O60315 1214 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 TIMP1P01033 207 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 MRPL12P52815 198 aaKnown RBP12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 SEC23AQ15436 765 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 CDC37Q16543 378 aaPredicted RBP12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 USH1GQ495M9 461 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 DUSP28Q4G0W2 176 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 C9orf50Q5SZB4 431 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 FAM109BQ6ICB4 259 aaPredicted RBP12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 Q7L0L9 218 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 TBX21Q9UL17 535 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 COL6A3P12111 3177 aa12.92□□□□□ -0.34
SERPINA3-208ENST00000556968 TLR3O15455 904 aaKnown RBP12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 SGSM2O43147 1006 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 CYP21A2P08686 494 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 EDNRBP24530 442 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 PTH1RQ03431 593 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 FPGSQ05932 587 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 PDE4DQ08499 809 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 TMEM63BQ5T3F8 832 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 CXCL17Q6UXB2 119 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 CYB5R4Q7L1T6 521 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 SLC43A3Q8NBI5 491 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 WDR11Q9BZH6 1224 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 MTMR10Q9NXD2 777 aa12.91□□□□□ -0.34
SERPINA3-208ENST00000556968 DHX16O60231 1041 aaKnown RBP12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 PTGS1P23219 599 aa12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 ITGA7Q13683 1181 aa12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 QRICH1Q2TAL8 776 aa12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 MFSD5Q6N075 450 aa12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 FBXO11Q86XK2 927 aa12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 MCF2L2Q86YR7 1114 aa12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 MRPL11Q9Y3B7 192 aaKnown RBP12.9□□□□□ -0.34
SERPINA3-208ENST00000556968 KLRF2D3W0D1 207 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 E7EWF7 191 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 NKRFO15226 690 aaKnown RBP eCLIP12.89□□□□□ -0.355e-6■■■■□ 25.9
SERPINA3-208ENST00000556968 CD4P01730 458 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 CPT1AP50416 773 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 EPHB4P54760 987 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 SMAD3P84022 425 aaKnown RBP12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 RALYLQ86SE5 291 aaKnown RBP12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 STAG2Q8N3U4 1231 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 STXBP5LQ9Y2K9 1186 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 GTF3C3Q9Y5Q9 886 aa12.89□□□□□ -0.35
SERPINA3-208ENST00000556968 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 ERICH2A1L162 156 aa12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 PALM3A6NDB9 673 aaPredicted RBP12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 SART3Q15020 963 aaKnown RBP12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 PPP2R5BQ15173 497 aa12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 BRDTQ58F21 947 aaPredicted RBP12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 OR6J1Q8NGC5 347 aa12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 NCOA7Q8NI08 942 aa12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 NSUN6Q8TEA1 469 aaKnown RBP12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 TBC1D5Q92609 795 aa12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 MTMR8Q96EF0 704 aa12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
SERPINA3-208ENST00000556968 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms