RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 FBLN1P23142 703 aa7.48□□□□□ -1.21
LINC00648-203ENST00000556923 IGFBP6P24592 240 aaPredicted RBP7.48□□□□□ -1.21
LINC00648-203ENST00000556923 LILRA6Q6PI73 481 aa7.48□□□□□ -1.21
LINC00648-203ENST00000556923 CPNE8Q86YQ8 564 aa7.48□□□□□ -1.21
LINC00648-203ENST00000556923 KCNC2Q96PR1 638 aa7.48□□□□□ -1.21
LINC00648-203ENST00000556923 CAPN10Q9HC96 672 aa7.48□□□□□ -1.21
LINC00648-203ENST00000556923 PARD6AQ9NPB6 346 aa7.48□□□□□ -1.21
LINC00648-203ENST00000556923 RWDD3Q9Y3V2 267 aa7.48□□□□□ -1.21
LINC00648-203ENST00000556923 ZC3H12DA2A288 527 aaKnown RBP7.47□□□□□ -1.21
LINC00648-203ENST00000556923 F8W031 263 aaPredicted RBP7.47□□□□□ -1.21
LINC00648-203ENST00000556923 SMAD7O15105 426 aaKnown RBP7.47□□□□□ -1.21
LINC00648-203ENST00000556923 KCNH1O95259 989 aa7.47□□□□□ -1.21
LINC00648-203ENST00000556923 PAMP19021 973 aa7.47□□□□□ -1.21
LINC00648-203ENST00000556923 HOXA5P20719 270 aa7.47□□□□□ -1.21
LINC00648-203ENST00000556923 ZNF143P52747 638 aaPredicted RBP7.47□□□□□ -1.21
LINC00648-203ENST00000556923 PRR5P85299 388 aa7.47□□□□□ -1.21
LINC00648-203ENST00000556923 NCAPHQ15003 741 aa7.47□□□□□ -1.21
LINC00648-203ENST00000556923 MARCH10Q8NA82 808 aaPredicted RBP7.47□□□□□ -1.21
LINC00648-203ENST00000556923 APBA2Q99767 749 aa7.47□□□□□ -1.21
LINC00648-203ENST00000556923 NPHP3-ACAD11A0A0J9YXS1 232 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 TCF3P15923 654 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 VMACQ2NL98 169 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 BVESQ8NE79 360 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 COPS5Q92905 334 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 ZNF428Q96B54 188 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 LGR4Q9BXB1 951 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 ZCCHC4Q9H5U6 513 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 RXFP1Q9HBX9 757 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 GULP1Q9UBP9 304 aa7.46□□□□□ -1.22
LINC00648-203ENST00000556923 CCDC9Q9Y3X0 531 aaKnown RBP7.46□□□□□ -1.22
LINC00648-203ENST00000556923 LIMS1P48059 325 aa7.45□□□□□ -1.22
LINC00648-203ENST00000556923 SCRN1Q12765 414 aa7.45□□□□□ -1.22
LINC00648-203ENST00000556923 C6orf15Q6UXA7 325 aaPredicted RBP7.45□□□□□ -1.22
LINC00648-203ENST00000556923 LZTR1Q8N653 840 aa7.45□□□□□ -1.22
LINC00648-203ENST00000556923 C20orf173Q96LM9 149 aa7.45□□□□□ -1.22
LINC00648-203ENST00000556923 PWWP2AQ96N64 755 aa7.45□□□□□ -1.22
LINC00648-203ENST00000556923 MTA3Q9BTC8 594 aa7.45□□□□□ -1.22
LINC00648-203ENST00000556923 ACTR10Q9NZ32 417 aa7.45□□□□□ -1.22
LINC00648-203ENST00000556923 CLEC1BQ9P126 229 aa7.45□□□□□ -1.22
LINC00648-203ENST00000556923 DBR1Q9UK59 544 aaKnown RBP7.45□□□□□ -1.22
LINC00648-203ENST00000556923 C7orf72A4D263 438 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 SSBP05455 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
LINC00648-203ENST00000556923 NAT2P11245 290 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 PFKLP17858 780 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 MBLAC2Q68D91 279 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 GTF2IRD2BQ6EKJ0 949 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 POMZP3Q6PJE2 187 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 GTF2IRD2Q86UP8 949 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 VPS37DQ86XT2 251 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 TRIM59Q8IWR1 403 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 CRACR2BQ8N4Y2 399 aaPredicted RBP7.44□□□□□ -1.22
LINC00648-203ENST00000556923 MRGPRX3Q96LB0 322 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 GPRC5CQ9NQ84 441 aa7.44□□□□□ -1.22
LINC00648-203ENST00000556923 TRBV23OR9-2A0A075B6M9 112 aa7.43□□□□□ -1.22
LINC00648-203ENST00000556923 B2RBV5 119 aa7.43□□□□□ -1.22
LINC00648-203ENST00000556923 NOP56O00567 594 aaKnown RBP7.43□□□□□ -1.22
LINC00648-203ENST00000556923 PLS3P13797 630 aa7.43□□□□□ -1.22
LINC00648-203ENST00000556923 ATF2P15336 505 aa7.43□□□□□ -1.22
LINC00648-203ENST00000556923 CYP4F3Q08477 520 aa7.43□□□□□ -1.22
LINC00648-203ENST00000556923 TARBP2Q15633 366 aaKnown RBP7.43□□□□□ -1.22
LINC00648-203ENST00000556923 TNNI3KQ59H18 835 aa7.43□□□□□ -1.22
LINC00648-203ENST00000556923 LARP1BQ659C4 914 aaKnown RBP7.43□□□□□ -1.22
LINC00648-203ENST00000556923 CABP7Q86V35 215 aa7.43□□□□□ -1.22
LINC00648-203ENST00000556923 PPP1R14AQ96A00 147 aa7.43□□□□□ -1.22
LINC00648-203ENST00000556923 A0A0G2JLL6 359 aaPredicted RBP7.42□□□□□ -1.22
LINC00648-203ENST00000556923 NPHS1O60500 1241 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 THBDP07204 575 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 ETFBP38117 255 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 CTSWP56202 376 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 FAM178BQ8IXR5 827 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 NETO2Q8NC67 525 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 MMP19Q99542 508 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 TINF2Q9BSI4 451 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 RNF38Q9H0F5 515 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 NKX2-4Q9H2Z4 354 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 BCAS3Q9H6U6 928 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 PRKAG3Q9UGI9 489 aa7.42□□□□□ -1.22
LINC00648-203ENST00000556923 TBX1O43435 398 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 PLA2G1BP04054 148 aaKnown RBP7.41□□□□□ -1.22
LINC00648-203ENST00000556923 ASGR2P07307 311 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 FGRP09769 529 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 MC3RP41968 323 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 MRM1Q6IN84 353 aaKnown RBP7.41□□□□□ -1.22
LINC00648-203ENST00000556923 LINC01356Q8N9X3 169 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 TP53I13Q8NBR0 393 aaPredicted RBP7.41□□□□□ -1.22
LINC00648-203ENST00000556923 MICAL1Q8TDZ2 1067 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 ALG3Q92685 438 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 TSPAN17Q96FV3 270 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC00648-203ENST00000556923 KRTAP4-9Q9BYQ8 210 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 XYLT2Q9H1B5 865 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
LINC00648-203ENST00000556923 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC00648-203ENST00000556923 FFAR3O14843 346 aa7.4□□□□□ -1.22
LINC00648-203ENST00000556923 NCAM1P13591 858 aa7.4□□□□□ -1.22
LINC00648-203ENST00000556923 FOXO4P98177 505 aa7.4□□□□□ -1.22
LINC00648-203ENST00000556923 GNL2Q13823 731 aaKnown RBP7.4□□□□□ -1.22
LINC00648-203ENST00000556923 INF2Q27J81 1249 aa7.4□□□□□ -1.22
LINC00648-203ENST00000556923 WWC2Q6AWC2 1192 aa7.4□□□□□ -1.22
LINC00648-203ENST00000556923 ZNF227Q86WZ6 799 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms