RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 GMCL1Q96IK5 515 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 CERS4Q9HA82 394 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 CYP39A1Q9NYL5 469 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 Q9Y3F1 56 aa10.73□□□□□ -0.69
HNRNPC-227ENST00000556897 LRRC37A2A6NM11 1700 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 PATL2C9JE40 543 aaKnown RBP10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 ZFYP08048 801 aaPredicted RBP10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 PDE4BQ07343 736 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 AAK1Q2M2I8 961 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 TMEM67Q5HYA8 995 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 RASGRP2Q7LDG7 609 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 C1QTNF1Q9BXJ1 281 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 NACAP1Q9BZK3 213 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 VTA1Q9NP79 307 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 PRR12Q9ULL5 1215 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 STX8Q9UNK0 236 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 TNKSO95271 1327 aa10.72□□□□□ -0.69
HNRNPC-227ENST00000556897 EPOPA6NHQ4 379 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 ERC2O15083 957 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 NMT2O60551 498 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 SLC3A2P08195 630 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 PFKMP08237 780 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 SUPT20HL2P0C7V6 817 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 PPARAQ07869 468 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 DUSP28Q4G0W2 176 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 KRT40Q6A162 431 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 RCSD1Q6JBY9 416 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 SEC62Q99442 399 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 CHMP4BQ9H444 224 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 CCPG1Q9ULG6 757 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 MTMR7Q9Y216 660 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 MTCH2Q9Y6C9 303 aa10.71□□□□□ -0.69
HNRNPC-227ENST00000556897 PLA2G6O60733 806 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 ICAM1P05362 532 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 MYL3P08590 195 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 POU3F3P20264 500 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 PURAQ00577 322 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 BAATQ14032 418 aaPredicted RBP10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 FAM47CQ5HY64 1035 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 MORC4Q8TE76 937 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 PPP1R13LQ8WUF5 828 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 ARNTL2Q8WYA1 636 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 GPATCH3Q96I76 525 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 WDR11Q9BZH6 1224 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 NAPBQ9H115 298 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 INCENPQ9NQS7 918 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 IL17RBQ9NRM6 502 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 BRWD1Q9NSI6 2320 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 SCN5AQ14524 2016 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 LCTP09848 1927 aa10.7□□□□□ -0.7
HNRNPC-227ENST00000556897 TSPY2A6NKD2 308 aa10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 ARHGEF15O94989 841 aa10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 ACTN1P12814 892 aa10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 CPT1AP50416 773 aa10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 ALDH5A1P51649 535 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 SLC9A7Q96T83 725 aa10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 MTG1Q9BT17 334 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 EPHX3Q9H6B9 360 aa10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 POLR3EQ9NVU0 708 aa10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 ADD3Q9UEY8 706 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 TRANK1O15050 2925 aa10.69□□□□□ -0.7
HNRNPC-227ENST00000556897 NFIBO00712 420 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 IQCF3P0C7M6 154 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 SLC16A2P36021 539 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 TAP1Q03518 808 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 CTDSPL2Q05D32 466 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 CCDC96Q2M329 555 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 LRRFIP1Q32MZ4 808 aaKnown RBP10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 NBPF20Q3BBV1 942 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 C20orf194Q5TEA3 1177 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 TTBK2Q6IQ55 1244 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 HERC6Q8IVU3 1022 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 OR6J1Q8NGC5 347 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 PHOSPHO2Q8TCD6 241 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 FTOQ9C0B1 505 aaKnown RBP eCLIP10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 COG5Q9UP83 839 aa10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.68□□□□□ -0.7
HNRNPC-227ENST00000556897 TET1Q8NFU7 2136 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 SCN10AQ9Y5Y9 1956 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 RBM47A0AV96 593 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 PTPDC1A2A3K4 754 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 KIF28PB7ZC32 967 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 FOXP2O15409 715 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 TLL1O43897 1013 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 RANBP6O60518 1105 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 CALML3P27482 149 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 RFC2P35250 354 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 GRB10Q13322 594 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 ZMYM1Q5SVZ6 1142 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 SLC30A10Q6XR72 485 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 SPRED2Q7Z698 418 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 MIER1Q8N108 512 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 RETREG2Q8NC44 543 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms