RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PNMA1Q8ND90 353 aa26.49■■□□□ 1.83
ACTN1-220ENST00000556433 ANKS1AQ92625 1134 aa26.49■■□□□ 1.83
ACTN1-220ENST00000556433 KAT14Q9H8E8 782 aa26.49■■□□□ 1.83
ACTN1-220ENST00000556433 LOC102724159A0A0B4J2E5 919 aa26.48■■□□□ 1.83
ACTN1-220ENST00000556433 PWP2Q15269 919 aaKnown RBP26.48■■□□□ 1.83
ACTN1-220ENST00000556433 ZSCAN10Q96SZ4 725 aaPredicted RBP26.48■■□□□ 1.83
ACTN1-220ENST00000556433 CPVLQ9H3G5 476 aa26.48■■□□□ 1.83
ACTN1-220ENST00000556433 ZSWIM5Q9P217 1185 aa26.48■■□□□ 1.83
ACTN1-220ENST00000556433 RPS6P62753 249 aaKnown RBP26.47■■□□□ 1.83
ACTN1-220ENST00000556433 WDR11Q9BZH6 1224 aa26.47■■□□□ 1.83
ACTN1-220ENST00000556433 SEMA6BQ9H3T3 888 aa26.47■■□□□ 1.83
ACTN1-220ENST00000556433 PDE4AP27815 886 aa26.46■■□□□ 1.83
ACTN1-220ENST00000556433 ITGA7Q13683 1181 aa26.46■■□□□ 1.83
ACTN1-220ENST00000556433 USH1GQ495M9 461 aa26.46■■□□□ 1.83
ACTN1-220ENST00000556433 DUSP28Q4G0W2 176 aa26.46■■□□□ 1.83
ACTN1-220ENST00000556433 SLC43A3Q8NBI5 491 aa26.46■■□□□ 1.83
ACTN1-220ENST00000556433 KRT23Q9C075 422 aa26.46■■□□□ 1.83
ACTN1-220ENST00000556433 CD4P01730 458 aa26.45■■□□□ 1.82
ACTN1-220ENST00000556433 TMEM199Q8N511 208 aa26.45■■□□□ 1.82
ACTN1-220ENST00000556433 ENAHQ8N8S7 591 aaPredicted RBP26.45■■□□□ 1.82
ACTN1-220ENST00000556433 MPHOSPH6Q99547 160 aaKnown RBP26.45■■□□□ 1.82
ACTN1-220ENST00000556433 PPP1R12CQ9BZL4 782 aa26.45■■□□□ 1.82
ACTN1-220ENST00000556433 GRIN2DO15399 1336 aa26.44■■□□□ 1.82
ACTN1-220ENST00000556433 RBM47A0AV96 593 aaKnown RBP26.44■■□□□ 1.82
ACTN1-220ENST00000556433 PDE4DQ08499 809 aa26.44■■□□□ 1.82
ACTN1-220ENST00000556433 PPIGQ13427 754 aaKnown RBP eCLIP26.44■■□□□ 1.821e-11■□□□□ 11.3
ACTN1-220ENST00000556433 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.44■■□□□ 1.828e-7■■■□□ 15.4
ACTN1-220ENST00000556433 SEZ6LQ9BYH1 1024 aa26.44■■□□□ 1.82
ACTN1-220ENST00000556433 IL25Q9H293 177 aa26.44■■□□□ 1.82
ACTN1-220ENST00000556433 CNNM2Q9H8M5 875 aa26.44■■□□□ 1.82
ACTN1-220ENST00000556433 TNKSO95271 1327 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 CSF2RAP15509 400 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 PSMC6P62333 389 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 CDC37Q16543 378 aaPredicted RBP26.43■■□□□ 1.82
ACTN1-220ENST00000556433 ASPRV1Q53RT3 343 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 TTC22Q5TAA0 569 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 ADGRF4Q8IZF3 695 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 RGS22Q8NE09 1264 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 DNERQ8NFT8 737 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 CDX2Q99626 313 aaPredicted RBP26.43■■□□□ 1.82
ACTN1-220ENST00000556433 UBAC1Q9BSL1 405 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 COL6A3P12111 3177 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 LCTP09848 1927 aa26.43■■□□□ 1.82
ACTN1-220ENST00000556433 B4DLN1 442 aa26.42■■□□□ 1.82
ACTN1-220ENST00000556433 GSPT1P15170 499 aaKnown RBP26.42■■□□□ 1.82
ACTN1-220ENST00000556433 CYP2C18P33260 490 aa26.42■■□□□ 1.82
ACTN1-220ENST00000556433 MRPL12P52815 198 aaKnown RBP26.42■■□□□ 1.82
ACTN1-220ENST00000556433 C16orf59Q7L2K0 433 aa26.42■■□□□ 1.82
ACTN1-220ENST00000556433 VAT1LQ9HCJ6 419 aa26.42■■□□□ 1.82
ACTN1-220ENST00000556433 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.41■■□□□ 1.82
ACTN1-220ENST00000556433 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.41■■□□□ 1.82
ACTN1-220ENST00000556433 PARP1P09874 1014 aaKnown RBP26.41■■□□□ 1.82
ACTN1-220ENST00000556433 EDNRBP24530 442 aa26.41■■□□□ 1.82
ACTN1-220ENST00000556433 TMEM240Q5SV17 173 aa26.41■■□□□ 1.82
ACTN1-220ENST00000556433 OR6J1Q8NGC5 347 aa26.41■■□□□ 1.82
ACTN1-220ENST00000556433 TRPV6Q9H1D0 765 aa26.41■■□□□ 1.82
ACTN1-220ENST00000556433 TTYH1Q9H313 450 aaPredicted RBP26.41■■□□□ 1.82
ACTN1-220ENST00000556433 LRRC37A2A6NM11 1700 aa26.41■■□□□ 1.82
ACTN1-220ENST00000556433 DLL1O00548 723 aa26.4■■□□□ 1.82
ACTN1-220ENST00000556433 DHX16O60231 1041 aaKnown RBP26.4■■□□□ 1.82
ACTN1-220ENST00000556433 ACRP10323 421 aa26.4■■□□□ 1.82
ACTN1-220ENST00000556433 IRX6P78412 446 aaPredicted RBP26.4■■□□□ 1.82
ACTN1-220ENST00000556433 TBC1D5Q92609 795 aa26.4■■□□□ 1.82
ACTN1-220ENST00000556433 POLR3EQ9NVU0 708 aa26.4■■□□□ 1.82
ACTN1-220ENST00000556433 ABCB11O95342 1321 aa26.39■■□□□ 1.82
ACTN1-220ENST00000556433 MYL3P08590 195 aa26.39■■□□□ 1.82
ACTN1-220ENST00000556433 CPT1AP50416 773 aa26.39■■□□□ 1.82
ACTN1-220ENST00000556433 QRICH1Q2TAL8 776 aa26.39■■□□□ 1.82
ACTN1-220ENST00000556433 IFIT1BQ5T764 474 aaKnown RBP26.39■■□□□ 1.82
ACTN1-220ENST00000556433 ZNF365Q70YC5 407 aa26.39■■□□□ 1.82
ACTN1-220ENST00000556433 SCFD2Q8WU76 684 aa26.39■■□□□ 1.82
ACTN1-220ENST00000556433 HIPK3Q9H422 1215 aa26.39■■□□□ 1.82
ACTN1-220ENST00000556433 LAMA4Q16363 1823 aa26.39■■□□□ 1.81
ACTN1-220ENST00000556433 NKRFO15226 690 aaKnown RBP eCLIP26.38■■□□□ 1.812e-6■■□□□ 14.5
ACTN1-220ENST00000556433 B4GALT4O60513 344 aa26.38■■□□□ 1.81
ACTN1-220ENST00000556433 PPP2R5BQ15173 497 aa26.38■■□□□ 1.81
ACTN1-220ENST00000556433 RUFY2Q8WXA3 655 aa26.38■■□□□ 1.81
ACTN1-220ENST00000556433 MAF1Q9H063 256 aa26.38■■□□□ 1.81
ACTN1-220ENST00000556433 JMJD4Q9H9V9 463 aa26.38■■□□□ 1.81
ACTN1-220ENST00000556433 GPHNQ9NQX3 736 aaPredicted RBP26.38■■□□□ 1.81
ACTN1-220ENST00000556433 PURAQ00577 322 aaKnown RBP26.37■■□□□ 1.81
ACTN1-220ENST00000556433 BRDTQ58F21 947 aaPredicted RBP26.37■■□□□ 1.81
ACTN1-220ENST00000556433 PSRC1Q6PGN9 363 aaPredicted RBP26.37■■□□□ 1.81
ACTN1-220ENST00000556433 CYB5R4Q7L1T6 521 aa26.37■■□□□ 1.81
ACTN1-220ENST00000556433 FBXO11Q86XK2 927 aa26.37■■□□□ 1.81
ACTN1-220ENST00000556433 MCF2L2Q86YR7 1114 aa26.37■■□□□ 1.81
ACTN1-220ENST00000556433 SYTL5Q8TDW5 730 aaPredicted RBP26.37■■□□□ 1.81
ACTN1-220ENST00000556433 TAAR1Q96RJ0 339 aa26.37■■□□□ 1.81
ACTN1-220ENST00000556433 IL23AQ9NPF7 189 aa26.37■■□□□ 1.81
ACTN1-220ENST00000556433 MRPL11Q9Y3B7 192 aaKnown RBP26.37■■□□□ 1.81
ACTN1-220ENST00000556433 LAMA2P24043 3122 aaKnown RBP26.37■■□□□ 1.81
ACTN1-220ENST00000556433 RAD50Q92878 1312 aa26.37■■□□□ 1.81
ACTN1-220ENST00000556433 TMEM265A0A087WTH1 108 aa26.36■■□□□ 1.81
ACTN1-220ENST00000556433 TXNP10599 105 aaKnown RBP26.36■■□□□ 1.81
ACTN1-220ENST00000556433 CHMLP26374 656 aa26.36■■□□□ 1.81
ACTN1-220ENST00000556433 CCL23P55773 120 aa26.36■■□□□ 1.81
ACTN1-220ENST00000556433 TRDNQ13061 729 aa26.36■■□□□ 1.81
ACTN1-220ENST00000556433 SEC23AQ15436 765 aa26.36■■□□□ 1.81
ACTN1-220ENST00000556433 STAG2Q8N3U4 1231 aa26.36■■□□□ 1.81
ACTN1-220ENST00000556433 COPS5Q92905 334 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms