RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 ZNF526Q8TF50 670 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-237ENST00000556274 WDR18Q9BV38 432 aa5.89□□□□□ -1.47
ATXN3-237ENST00000556274 NOC4LQ9BVI4 516 aaKnown RBP5.89□□□□□ -1.47
ATXN3-237ENST00000556274 BRIP1Q9BX63 1249 aa5.89□□□□□ -1.47
ATXN3-237ENST00000556274 TMX4Q9H1E5 349 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-237ENST00000556274 AP4E1Q9UPM8 1137 aa5.89□□□□□ -1.47
ATXN3-237ENST00000556274 KIAA1551Q9HCM1 1747 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 POLR2AP24928 1970 aaKnown RBP5.88□□□□□ -1.47
ATXN3-237ENST00000556274 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 DHX15O43143 795 aaKnown RBP5.88□□□□□ -1.47
ATXN3-237ENST00000556274 ADH5P11766 374 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 RLBP1P12271 317 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 BMP3P12645 472 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 SLFN5Q08AF3 891 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 UVSSAQ2YD98 709 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 PARP10Q53GL7 1025 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 KSR2Q6VAB6 950 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 NLRP10Q86W26 655 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 PI4KAP1Q8N8J0 262 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 C2CD4AQ8NCU7 369 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-237ENST00000556274 GPBAR1Q8TDU6 330 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 FAM89AQ96GI7 184 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 RBM17Q96I25 401 aaKnown RBP5.88□□□□□ -1.47
ATXN3-237ENST00000556274 BACH2Q9BYV9 841 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 PPP1R9AQ9ULJ8 1098 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 ARID1BQ8NFD5 2236 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-237ENST00000556274 COL11A2P13942 1736 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-237ENST00000556274 DDX60Q8IY21 1712 aaKnown RBP5.88□□□□□ -1.47
ATXN3-237ENST00000556274 FER1L6Q2WGJ9 1857 aa5.88□□□□□ -1.47
ATXN3-237ENST00000556274 F6X3S4 739 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 NPR1P16066 1061 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 KCNA3P22001 575 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 ALDH1B1P30837 517 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 ASPAP45381 313 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 LIG3P49916 1009 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 TSNAXIP1Q2TAA8 658 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-237ENST00000556274 DDX46Q7L014 1031 aaKnown RBP5.87□□□□□ -1.47
ATXN3-237ENST00000556274 MRRFQ96E11 262 aaKnown RBP5.87□□□□□ -1.47
ATXN3-237ENST00000556274 MASTLQ96GX5 879 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 MYRFLQ96LU7 910 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 METTL22Q9BUU2 404 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-237ENST00000556274 KCNF1Q9H3M0 494 aa5.87□□□□□ -1.47
ATXN3-237ENST00000556274 CWC25Q9NXE8 425 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-237ENST00000556274 PXDNLA1KZ92 1463 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 UBN2Q6ZU65 1347 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 SH3TC1Q8TE82 1336 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 SYNGAP1Q96PV0 1343 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 UNCXA6NJT0 531 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 IRS4O14654 1257 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-237ENST00000556274 DYRK3O43781 588 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 H2AFB1P0C5Y9 115 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 H2AFB2P0C5Z0 115 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 SRGNP10124 158 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 RPS26P62854 115 aaKnown RBP5.86□□□□□ -1.47
ATXN3-237ENST00000556274 ID3Q02535 119 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 CWF19L2Q2TBE0 894 aaKnown RBP5.86□□□□□ -1.47
ATXN3-237ENST00000556274 KIF4BQ2VIQ3 1234 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 SGO2Q562F6 1265 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 SCARA3Q6AZY7 606 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 STYK1Q6J9G0 422 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 AGMOQ6ZNB7 445 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 PRR23CQ6ZRP0 262 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 RELL1Q8IUW5 271 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 FAM20CQ8IXL6 584 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 FBLIM1Q8WUP2 373 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 FRAT1Q92837 279 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-237ENST00000556274 SMC4Q9NTJ3 1288 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 C9orf78Q9NZ63 289 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-237ENST00000556274 STOML1Q9UBI4 398 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 PCDHA4Q9UN74 947 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 TLR6Q9Y2C9 796 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 PCDHB5Q9Y5E4 795 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 ACTL7BQ9Y614 415 aa5.86□□□□□ -1.47
ATXN3-237ENST00000556274 TNRC6CQ9HCJ0 1690 aaKnown RBP5.85□□□□□ -1.47
ATXN3-237ENST00000556274 C10orf71Q711Q0 1435 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 TMPRSS2O15393 492 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 NTSR2O95665 410 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 TFE3P19532 575 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-237ENST00000556274 MAP4P27816 1152 aaKnown RBP5.85□□□□□ -1.47
ATXN3-237ENST00000556274 GBP2P32456 591 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-237ENST00000556274 PTPN11Q06124 597 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-237ENST00000556274 PWP1Q13610 501 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 LDLRAD1Q5T700 205 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 C9orf131Q5VYM1 1079 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 OLFM4Q6UX06 510 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 BEND4Q6ZU67 534 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 UBE3BQ7Z3V4 1068 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 LRP10Q7Z4F1 713 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 CCDC191Q8NCU4 936 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 PHC3Q8NDX5 983 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 DNAAF4Q8WXU2 420 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 SSH1Q8WYL5 1049 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 ISCA1Q9BUE6 129 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 RSRP1Q9BUV0 290 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 MIR1-1HGQ9H1L0 117 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 FAM105AQ9NUU6 356 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 CACNA2D2Q9NY47 1150 aa5.85□□□□□ -1.47
ATXN3-237ENST00000556274 CRIM1Q9NZV1 1036 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms