RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 C1orf229Q6ZS94 237 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-236ENST00000556220 DZIP1Q86YF9 867 aaKnown RBP8.5□□□□□ -1.05
ATXN3-236ENST00000556220 PAGR1Q9BTK6 254 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 ZCCHC2Q9C0B9 1178 aaKnown RBP8.5□□□□□ -1.05
ATXN3-236ENST00000556220 CWC22Q9HCG8 908 aaKnown RBP8.5□□□□□ -1.05
ATXN3-236ENST00000556220 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
ATXN3-236ENST00000556220 MKL2Q9ULH7 1088 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 PCDHGA11Q9Y5H2 935 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 TACC3Q9Y6A5 838 aa8.5□□□□□ -1.05
ATXN3-236ENST00000556220 XIRP2A4UGR9 3374 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 USP17L10C9JJH3 530 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 MAP4K4O95819 1239 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-236ENST00000556220 CYP2C19P33261 490 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 PHKA1P46020 1223 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 RFX5P48382 616 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-236ENST00000556220 SNRPNP63162 240 aaKnown RBP8.49□□□□□ -1.05
ATXN3-236ENST00000556220 CCNA1P78396 465 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 CTBSQ01459 385 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 EXOSC9Q06265 439 aaKnown RBP8.49□□□□□ -1.05
ATXN3-236ENST00000556220 EML3Q32P44 896 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 SLCO4C1Q6ZQN7 724 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 ATG9AQ7Z3C6 839 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 ALYREFQ86V81 257 aaKnown RBP8.49□□□□□ -1.05
ATXN3-236ENST00000556220 ZNF295-AS1Q8N0V1 137 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 NPLOC4Q8TAT6 608 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 ALG2Q9H553 416 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 ABCF2Q9UG63 623 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 SERTAD1Q9UHV2 236 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 HERC5Q9UII4 1024 aaKnown RBP8.49□□□□□ -1.05
ATXN3-236ENST00000556220 RABGAP1Q9Y3P9 1069 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 HCN4Q9Y3Q4 1203 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 PHIPQ8WWQ0 1821 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 FANCIQ9NVI1 1328 aa8.49□□□□□ -1.05
ATXN3-236ENST00000556220 PIK3CDO00329 1044 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 MSTNO14793 375 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 BACH1O14867 736 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 KIAA0355O15063 1070 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 CNMDO75829 334 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 ASNSP08243 561 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 CYBAP13498 195 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 ADCYAP1R1P41586 468 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 DDX10Q13206 875 aaKnown RBP8.48□□□□□ -1.05
ATXN3-236ENST00000556220 ADGRE1Q14246 886 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 GRB14Q14449 540 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 ATP2B3Q16720 1220 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 SPTY2D1Q68D10 685 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-236ENST00000556220 FERMT2Q96AC1 680 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 LRFN3Q9BTN0 628 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 GINM1Q9NU53 330 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 ZDHHC3Q9NYG2 299 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 PI4KBQ9UBF8 816 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 NOD1Q9Y239 953 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
ATXN3-236ENST00000556220 ATXN7O15265 892 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-236ENST00000556220 SEPT4O43236 478 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 CLTBP09497 229 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 ARAFP10398 606 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 RAG1P15918 1043 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 JAG1P78504 1218 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 FPGSQ05932 587 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 LRRC41Q15345 812 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 CCDC85BQ15834 202 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-236ENST00000556220 WDR78Q5VTH9 848 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 ANO1Q5XXA6 986 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 OLFML2BQ68BL8 750 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 CCDC102BQ68D86 513 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 ERICH6Q7L0X2 663 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 ZNF384Q8TF68 577 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 NECAB3Q96P71 396 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-236ENST00000556220 PRDM12Q9H4Q4 367 aa8.47□□□□□ -1.05
ATXN3-236ENST00000556220 CXXC1Q9P0U4 656 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-236ENST00000556220 A0A1W2PNR3 127 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L15C9J2P7 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L13C9JLJ4 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L11C9JVI0 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L18D6R9N7 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L22D6RA61 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L17D6RBQ6 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L19D6RCP7 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L20D6RJB6 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 PIK3R2O00459 728 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 CIAO1O76071 339 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 LDHCP07864 332 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 SKIP12755 728 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 MECOMQ03112 1051 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L24Q0WX57 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 RASGRF1Q13972 1273 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 ARSJQ5FYB0 599 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP17L2Q6R6M4 530 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 CATSPERGQ6ZRH7 1159 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 DPP9Q86TI2 863 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 METTL16Q86W50 562 aaKnown RBP8.46□□□□□ -1.06
ATXN3-236ENST00000556220 FOXP4Q8IVH2 680 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-236ENST00000556220 PBX4Q9BYU1 374 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 USP44Q9H0E7 712 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 DHX36Q9H2U1 1008 aaKnown RBP8.46□□□□□ -1.06
ATXN3-236ENST00000556220 EPHX3Q9H6B9 360 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 PRKRIP1Q9H875 184 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-236ENST00000556220 TMEM39AQ9NV64 488 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 IVNS1ABPQ9Y6Y0 642 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms