RNA–Protein interactions for RNA: ENST00000555934.1

LINC00643-204, long intergenic non-protein coding RNA 643, humanhuman

TSL 2

Gene LINC00643, Length 1,184 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-204ENST00000555934 KRTAP19-1Q8IUB9 90 aa8.22□□□□□ -1.09
LINC00643-204ENST00000555934 DCAF4Q8WV16 495 aa8.22□□□□□ -1.09
LINC00643-204ENST00000555934 NINJ1Q92982 152 aa8.22□□□□□ -1.09
LINC00643-204ENST00000555934 FCRL2Q96LA5 508 aaPredicted RBP8.22□□□□□ -1.09
LINC00643-204ENST00000555934 KRTAP9-9Q9BYP9 154 aa8.22□□□□□ -1.09
LINC00643-204ENST00000555934 KRTAP9-4Q9BYQ2 154 aa8.22□□□□□ -1.09
LINC00643-204ENST00000555934 BTG4Q9NY30 223 aa8.22□□□□□ -1.09
LINC00643-204ENST00000555934 PCDHA9Q9Y5H5 950 aa8.22□□□□□ -1.09
LINC00643-204ENST00000555934 RASGRP1O95267 797 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 TBC1D8O95759 1140 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 LTBRP36941 435 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 TAF7LQ5H9L4 462 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 CNNM4Q6P4Q7 775 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 NBPF11Q86T75 865 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 RCBTB1Q8NDN9 531 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 HHIPL1Q96JK4 782 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 ALPK1Q96QP1 1244 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 TRIM39Q9HCM9 518 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 LMCD1Q9NZU5 365 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 PLAAQ9Y263 795 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 PCDHA2Q9Y5H9 948 aa8.21□□□□□ -1.1
LINC00643-204ENST00000555934 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.2□□□□□ -1.1
LINC00643-204ENST00000555934 MYCLP1P12525 358 aaPredicted RBP8.2□□□□□ -1.1
LINC00643-204ENST00000555934 ENDOUP21128 410 aaKnown RBP8.2□□□□□ -1.1
LINC00643-204ENST00000555934 MASP1P48740 699 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 ACBD5Q5T8D3 534 aaPredicted RBP8.2□□□□□ -1.1
LINC00643-204ENST00000555934 E4F1Q66K89 784 aaPredicted RBP8.2□□□□□ -1.1
LINC00643-204ENST00000555934 STYK1Q6J9G0 422 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 MTDHQ86UE4 582 aaKnown RBP8.2□□□□□ -1.1
LINC00643-204ENST00000555934 JAMLQ86YT9 394 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 MFSD3Q96ES6 412 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 SCLYQ96I15 445 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 MAP6Q96JE9 813 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 CHAMP1Q96JM3 812 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 G6PC3Q9BUM1 346 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 PAK6Q9NQU5 681 aaPredicted RBP8.2□□□□□ -1.1
LINC00643-204ENST00000555934 IFT57Q9NWB7 429 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 PCDHA8Q9Y5H6 950 aa8.2□□□□□ -1.1
LINC00643-204ENST00000555934 DNAJC6O75061 913 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 RFPL3O75679 317 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 DNAJC8O75937 253 aaPredicted RBP8.19□□□□□ -1.1
LINC00643-204ENST00000555934 CRTAMO95727 393 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 ZGLP1P0C6A0 271 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 CEBPAP49715 358 aaPredicted RBP8.19□□□□□ -1.1
LINC00643-204ENST00000555934 GUCY1A3Q02108 690 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 KCNAB2Q13303 367 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 TRIM61Q5EBN2 209 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 CYP2R1Q6VVX0 501 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 CEP128Q6ZU80 1094 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 MAMDC2Q7Z304 686 aaPredicted RBP8.19□□□□□ -1.1
LINC00643-204ENST00000555934 TP53INP2Q8IXH6 220 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 GSTCDQ8NEC7 633 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 JMJD8Q96S16 334 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 MMP19Q99542 508 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 FBXL7Q9UJT9 491 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 TMEM59LQ9UK28 342 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 ZNF281Q9Y2X9 895 aa8.19□□□□□ -1.1
LINC00643-204ENST00000555934 C7orf72A4D263 438 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 OPA1O60313 960 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 EFCAB14O75071 495 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 ZNF460Q14592 562 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 PLCL1Q15111 1095 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 HLA-DQA1Q5Y7H0 255 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 PI4K2BQ8TCG2 481 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 MAGEB10Q96LZ2 347 aaPredicted RBP8.18□□□□□ -1.1
LINC00643-204ENST00000555934 SPC25Q9HBM1 224 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 GPR27Q9NS67 375 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 PPARGC1AQ9UBK2 798 aaKnown RBP8.18□□□□□ -1.1
LINC00643-204ENST00000555934 GULP1Q9UBP9 304 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 TNPO3Q9Y5L0 923 aaKnown RBP8.18□□□□□ -1.1
LINC00643-204ENST00000555934 NPFFR2Q9Y5X5 522 aa8.18□□□□□ -1.1
LINC00643-204ENST00000555934 TRBV23OR9-2A0A075B6M9 112 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 FADS2P1A8MWK0 482 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 AQP7O14520 342 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 NCLP19338 710 aaKnown RBP8.17□□□□□ -1.1
LINC00643-204ENST00000555934 FUT4P22083 530 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 ERVFC1P60507 584 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 DUSP4Q13115 394 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 KIR3DS1Q14943 382 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 IQCEQ6IPM2 695 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 IFNL3Q8IZI9 196 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 UBR7Q8N806 425 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 LINC01599Q8WXQ3 324 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 GPATCH3Q96I76 525 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 TNFRSF10DQ9UBN6 386 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 ADAMTS6Q9UKP5 1117 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 PRKAB1Q9Y478 270 aa8.17□□□□□ -1.1
LINC00643-204ENST00000555934 NPHS1O60500 1241 aa8.16□□□□□ -1.1
LINC00643-204ENST00000555934 SRGAP2CP0DJJ0 459 aa8.16□□□□□ -1.1
LINC00643-204ENST00000555934 BCL6P41182 706 aa8.16□□□□□ -1.1
LINC00643-204ENST00000555934 GP2P55259 537 aaKnown RBP8.16□□□□□ -1.1
LINC00643-204ENST00000555934 RTP1P59025 263 aa8.16□□□□□ -1.1
LINC00643-204ENST00000555934 GPR85P60893 370 aa8.16□□□□□ -1.1
LINC00643-204ENST00000555934 SLC14A2Q15849 920 aa8.16□□□□□ -1.1
LINC00643-204ENST00000555934 LRRTM3Q86VH5 581 aa8.16□□□□□ -1.1
LINC00643-204ENST00000555934 AGBL5Q8NDL9 886 aa8.16□□□□□ -1.1
LINC00643-204ENST00000555934 TARS2Q9BW92 718 aaKnown RBP8.16□□□□□ -1.1
LINC00643-204ENST00000555934 RWDD3Q9Y3V2 267 aa8.16□□□□□ -1.1
LINC00643-204ENST00000555934 TIMM13Q9Y5L4 95 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms