RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 NSUN6Q8TEA1 469 aaKnown RBP26.46■■□□□ 1.83
CDKN3-208ENST00000555837 ZSWIM6Q9HCJ5 1215 aa26.46■■□□□ 1.83
CDKN3-208ENST00000555837 RBM27Q9P2N5 1060 aaKnown RBP26.46■■□□□ 1.83
CDKN3-208ENST00000555837 SOWAHBA6NEL2 793 aa26.45■■□□□ 1.82
CDKN3-208ENST00000555837 DNM1LO00429 736 aa26.45■■□□□ 1.82
CDKN3-208ENST00000555837 ZNF865P0CJ78 1059 aaPredicted RBP26.45■■□□□ 1.82
CDKN3-208ENST00000555837 ALDH5A1P51649 535 aaPredicted RBP26.45■■□□□ 1.82
CDKN3-208ENST00000555837 PDE4DQ08499 809 aa26.45■■□□□ 1.82
CDKN3-208ENST00000555837 PRAMEF19Q5SWL8 479 aa26.45■■□□□ 1.82
CDKN3-208ENST00000555837 IWS1Q96ST2 819 aa26.45■■□□□ 1.82
CDKN3-208ENST00000555837 GOLGA8AA7E2F4 631 aa26.44■■□□□ 1.82
CDKN3-208ENST00000555837 GOLGA8BA8MQT2 603 aa26.44■■□□□ 1.82
CDKN3-208ENST00000555837 CYTH3O43739 400 aa26.44■■□□□ 1.82
CDKN3-208ENST00000555837 TMTC3Q6ZXV5 915 aa26.44■■□□□ 1.82
CDKN3-208ENST00000555837 MORC4Q8TE76 937 aa26.44■■□□□ 1.82
CDKN3-208ENST00000555837 BRF1Q92994 677 aa26.44■■□□□ 1.82
CDKN3-208ENST00000555837 CUL5Q93034 780 aa26.44■■□□□ 1.82
CDKN3-208ENST00000555837 C11orf49Q9H6J7 331 aa26.44■■□□□ 1.82
CDKN3-208ENST00000555837 XPNPEP3Q9NQH7 507 aa26.44■■□□□ 1.82
CDKN3-208ENST00000555837 GCOM1H8Y6P7 765 aaPredicted RBP26.43■■□□□ 1.82
CDKN3-208ENST00000555837 hCG_1984214I3L0E3 225 aa26.43■■□□□ 1.82
CDKN3-208ENST00000555837 DUSP11O75319 330 aaKnown RBP26.43■■□□□ 1.82
CDKN3-208ENST00000555837 CFBP00751 764 aa26.43■■□□□ 1.82
CDKN3-208ENST00000555837 POLR2MP0CAP2 368 aa26.43■■□□□ 1.82
CDKN3-208ENST00000555837 METAP2P50579 478 aaKnown RBP eCLIP26.43■■□□□ 1.82
CDKN3-208ENST00000555837 GHRHRQ02643 423 aa26.43■■□□□ 1.82
CDKN3-208ENST00000555837 IQSEC1Q6DN90 963 aa26.43■■□□□ 1.82
CDKN3-208ENST00000555837 SLC30A10Q6XR72 485 aa26.43■■□□□ 1.82
CDKN3-208ENST00000555837 UBE2Q1Q7Z7E8 422 aa26.43■■□□□ 1.82
CDKN3-208ENST00000555837 ZNF713Q8N859 430 aaPredicted RBP26.43■■□□□ 1.82
CDKN3-208ENST00000555837 PAWRQ96IZ0 340 aaKnown RBP26.43■■□□□ 1.82
CDKN3-208ENST00000555837 TCEANC2Q96MN5 208 aa26.43■■□□□ 1.82
CDKN3-208ENST00000555837 AGXT2Q9BYV1 514 aa26.43■■□□□ 1.82
CDKN3-208ENST00000555837 FGD4Q96M96 766 aa26.42■■□□□ 1.82
CDKN3-208ENST00000555837 NR2E3Q9Y5X4 410 aa26.42■■□□□ 1.82
CDKN3-208ENST00000555837 RXRAP19793 462 aa26.41■■□□□ 1.82
CDKN3-208ENST00000555837 ANKRD1Q15327 319 aa26.41■■□□□ 1.82
CDKN3-208ENST00000555837 CCDC144BQ3MJ40 725 aa26.41■■□□□ 1.82
CDKN3-208ENST00000555837 ARHGEF16Q5VV41 709 aa26.41■■□□□ 1.82
CDKN3-208ENST00000555837 SRBD1Q8N5C6 995 aaKnown RBP26.41■■□□□ 1.82
CDKN3-208ENST00000555837 SYTL5Q8TDW5 730 aaPredicted RBP26.41■■□□□ 1.82
CDKN3-208ENST00000555837 DPF3Q92784 378 aa26.41■■□□□ 1.82
CDKN3-208ENST00000555837 RMDN3Q96TC7 470 aa26.41■■□□□ 1.82
CDKN3-208ENST00000555837 GLT8D2Q9H1C3 349 aa26.41■■□□□ 1.82
CDKN3-208ENST00000555837 HSD17B4P51659 736 aa26.4■■□□□ 1.82
CDKN3-208ENST00000555837 AKAP17AQ02040 695 aaKnown RBP26.4■■□□□ 1.82
CDKN3-208ENST00000555837 TNFAIP2Q03169 654 aa26.4■■□□□ 1.82
CDKN3-208ENST00000555837 CPLX2Q6PUV4 134 aaKnown RBP26.4■■□□□ 1.82
CDKN3-208ENST00000555837 NOL8Q76FK4 1167 aaKnown RBP26.4■■□□□ 1.82
CDKN3-208ENST00000555837 PCSK9Q8NBP7 692 aaKnown RBP26.4■■□□□ 1.82
CDKN3-208ENST00000555837 TSEN34Q9BSV6 310 aaKnown RBP26.4■■□□□ 1.82
CDKN3-208ENST00000555837 BRPF3Q9ULD4 1205 aa26.4■■□□□ 1.82
CDKN3-208ENST00000555837 Q9Y3F1 56 aa26.4■■□□□ 1.82
CDKN3-208ENST00000555837 PLEKHA8P1O95397 391 aa26.39■■□□□ 1.82
CDKN3-208ENST00000555837 EVCP57679 992 aa26.39■■□□□ 1.82
CDKN3-208ENST00000555837 STXBP2Q15833 593 aa26.39■■□□□ 1.82
CDKN3-208ENST00000555837 AP5M1Q9H0R1 490 aa26.39■■□□□ 1.82
CDKN3-208ENST00000555837 PDRG1Q9NUG6 133 aa26.39■■□□□ 1.82
CDKN3-208ENST00000555837 NKRFO15226 690 aaKnown RBP eCLIP26.38■■□□□ 1.81
CDKN3-208ENST00000555837 ZEB2O60315 1214 aa26.38■■□□□ 1.81
CDKN3-208ENST00000555837 TAL1P17542 331 aaPredicted RBP26.38■■□□□ 1.81
CDKN3-208ENST00000555837 APOBRQ0VD83 1088 aa26.38■■□□□ 1.81
CDKN3-208ENST00000555837 BRDTQ58F21 947 aaPredicted RBP26.38■■□□□ 1.81
CDKN3-208ENST00000555837 SCFD2Q8WU76 684 aa26.38■■□□□ 1.81
CDKN3-208ENST00000555837 PIBF1Q8WXW3 757 aa26.38■■□□□ 1.81
CDKN3-208ENST00000555837 UPF2Q9HAU5 1272 aaKnown RBP26.38■■□□□ 1.81
CDKN3-208ENST00000555837 PPP1R11O60927 126 aaPredicted RBP26.37■■□□□ 1.81
CDKN3-208ENST00000555837 MYCNP04198 464 aaPredicted RBP26.37■■□□□ 1.81
CDKN3-208ENST00000555837 CPA1P15085 419 aa26.37■■□□□ 1.81
CDKN3-208ENST00000555837 EDNRBP24530 442 aa26.37■■□□□ 1.81
CDKN3-208ENST00000555837 PPP1R18Q6NYC8 613 aa26.37■■□□□ 1.81
CDKN3-208ENST00000555837 CCDC82Q8N4S0 544 aa26.37■■□□□ 1.81
CDKN3-208ENST00000555837 SMARCC2Q8TAQ2 1214 aa26.37■■□□□ 1.81
CDKN3-208ENST00000555837 CCDC12Q8WUD4 166 aaPredicted RBP26.37■■□□□ 1.81
CDKN3-208ENST00000555837 ZNF274Q96GC6 653 aaPredicted RBP26.37■■□□□ 1.81
CDKN3-208ENST00000555837 SMCHD1A6NHR9 2005 aa26.36■■□□□ 1.81
CDKN3-208ENST00000555837 NID2Q14112 1375 aa26.36■■□□□ 1.81
CDKN3-208ENST00000555837 MOXD2PA6NHM9 499 aa26.36■■□□□ 1.81
CDKN3-208ENST00000555837 EVI5O60447 810 aa26.36■■□□□ 1.81
CDKN3-208ENST00000555837 COL9A3Q14050 684 aaPredicted RBP26.36■■□□□ 1.81
CDKN3-208ENST00000555837 LRRC41Q15345 812 aa26.36■■□□□ 1.81
CDKN3-208ENST00000555837 KCNV1Q6PIU1 500 aa26.36■■□□□ 1.81
CDKN3-208ENST00000555837 IL27Q8NEV9 243 aa26.36■■□□□ 1.81
CDKN3-208ENST00000555837 KATNBL1Q9H079 304 aa26.36■■□□□ 1.81
CDKN3-208ENST00000555837 ALDH8A1Q9H2A2 487 aaPredicted RBP26.36■■□□□ 1.81
CDKN3-208ENST00000555837 EHMT1Q9H9B1 1298 aa26.36■■□□□ 1.81
CDKN3-208ENST00000555837 PIK3CDO00329 1044 aa26.35■■□□□ 1.81
CDKN3-208ENST00000555837 EIF3JO75822 258 aaKnown RBP26.35■■□□□ 1.81
CDKN3-208ENST00000555837 STAM2O75886 525 aa26.35■■□□□ 1.81
CDKN3-208ENST00000555837 COL6A1P12109 1028 aa26.35■■□□□ 1.81
CDKN3-208ENST00000555837 TTLL4Q14679 1199 aa26.35■■□□□ 1.81
CDKN3-208ENST00000555837 SLC35G1Q2M3R5 365 aa26.35■■□□□ 1.81
CDKN3-208ENST00000555837 ANO1Q5XXA6 986 aa26.35■■□□□ 1.81
CDKN3-208ENST00000555837 RAB11FIP4Q86YS3 637 aa26.35■■□□□ 1.81
CDKN3-208ENST00000555837 SENP6Q9GZR1 1112 aaPredicted RBP26.35■■□□□ 1.81
CDKN3-208ENST00000555837 PSTPIP2Q9H939 334 aa26.35■■□□□ 1.81
CDKN3-208ENST00000555837 CPLX1O14810 134 aa26.34■■□□□ 1.81
CDKN3-208ENST00000555837 C6orf222P0C671 652 aaPredicted RBP26.34■■□□□ 1.81
CDKN3-208ENST00000555837 CST5P28325 142 aaPredicted RBP26.34■■□□□ 1.81
CDKN3-208ENST00000555837 GJA9P57773 515 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms