RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 CHST3Q7LGC8 479 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 PPP1R13LQ8WUF5 828 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 CNNM2Q9H8M5 875 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 SENP2Q9HC62 589 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 VAT1LQ9HCJ6 419 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 WDR19Q8NEZ3 1342 aa16.08■□□□□ 0.16
SDR39U1-214ENST00000555778 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
SDR39U1-214ENST00000555778 PARP1P09874 1014 aaKnown RBP16.07■□□□□ 0.16
SDR39U1-214ENST00000555778 PSMC6P62333 389 aa16.07■□□□□ 0.16
SDR39U1-214ENST00000555778 ASPRV1Q53RT3 343 aa16.07■□□□□ 0.16
SDR39U1-214ENST00000555778 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
SDR39U1-214ENST00000555778 PCSK9Q8NBP7 692 aaKnown RBP16.07■□□□□ 0.16
SDR39U1-214ENST00000555778 PPP1R12CQ9BZL4 782 aa16.07■□□□□ 0.16
SDR39U1-214ENST00000555778 AP5M1Q9H0R1 490 aa16.07■□□□□ 0.16
SDR39U1-214ENST00000555778 VTA1Q9NP79 307 aa16.07■□□□□ 0.16
SDR39U1-214ENST00000555778 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 KIAA0355O15063 1070 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 SGSM2O43147 1006 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 PDE4DQ08499 809 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 SEC23AQ15436 765 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 ANKRD33Q7Z3H0 272 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 RUFY2Q8WXA3 655 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 TBC1D5Q92609 795 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 COL20A1Q9P218 1284 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 ADD3Q9UEY8 706 aaKnown RBP16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 KIAA1217Q5T5P2 1943 aa16.06■□□□□ 0.16
SDR39U1-214ENST00000555778 ELP1O95163 1332 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 BAZ2BQ9UIF8 2168 aaKnown RBP16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 FPGSQ05932 587 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 RALYLQ86SE5 291 aaKnown RBP16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 HOMER1Q86YM7 354 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 MORC4Q8TE76 937 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 ANKS1AQ92625 1134 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 COPS5Q92905 334 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 RNPC3Q96LT9 517 aaKnown RBP16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 WDR11Q9BZH6 1224 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 JMJD4Q9H9V9 463 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 TBX21Q9UL17 535 aa16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
SDR39U1-214ENST00000555778 ABCB11O95342 1321 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 UMODL1Q5DID0 1318 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 E7EWF7 191 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 ARVCFO00192 962 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 IFIT3O14879 490 aaKnown RBP16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 PPP1R11O60927 126 aaPredicted RBP16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 TRDNQ13061 729 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 COL9A3Q14050 684 aaPredicted RBP16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 PPP2R5BQ15173 497 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 FBXO11Q86XK2 927 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 FAM126BQ8IXS8 530 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 OR6J1Q8NGC5 347 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 PIBF1Q8WXW3 757 aa16.04■□□□□ 0.16
SDR39U1-214ENST00000555778 UNC80Q8N2C7 3258 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 GRIN2DO15399 1336 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 MROH7Q68CQ1 1323 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 ARIH2O95376 493 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 MYL3P08590 195 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 EIF2AK2P19525 551 aaKnown RBP16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 ANTXR2P58335 489 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 DUSP28Q4G0W2 176 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 MYL10Q9BUA6 226 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 GPHNQ9NQX3 736 aaPredicted RBP16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 TANC1Q9C0D5 1861 aa16.03■□□□□ 0.16
SDR39U1-214ENST00000555778 GBF1Q92538 1859 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 KLRF2D3W0D1 207 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 RBAK-RBAKDNI3L0D1 243 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 CFBP00751 764 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 EDNRBP24530 442 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 CDK7P50613 346 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 CHMP4BP1P59074 171 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 ITGA7Q13683 1181 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 IQSEC1Q6DN90 963 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 SYTL5Q8TDW5 730 aaPredicted RBP16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 TOX2Q96NM4 488 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 TAAR1Q96RJ0 339 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 TRPV6Q9H1D0 765 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 MTMR10Q9NXD2 777 aa16.02■□□□□ 0.16
SDR39U1-214ENST00000555778 SCN10AQ9Y5Y9 1956 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 OPLAHO14841 1288 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 SORBS3O60504 671 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 TIMP1P01033 207 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 ACRP10323 421 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 CSF2RAP15509 400 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 HOXA13P31271 388 aaPredicted RBP16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 CYP2C18P33260 490 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 NT5C2P49902 561 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 NKX3-2P78367 333 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 GRM4Q14833 912 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 WTAPQ15007 396 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 FAM109BQ6ICB4 259 aaPredicted RBP16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 RAB11FIP4Q86YS3 637 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 MB21D2Q8IYB1 491 aaPredicted RBP16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 NCOA7Q8NI08 942 aa16.01■□□□□ 0.15
SDR39U1-214ENST00000555778 PNMA2Q9UL42 364 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms